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SCNpilot_expt_500_bf_scaffold_3630_6

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(4322..4885)

Top 3 Functional Annotations

Value Algorithm Source
YciO family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEZ9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 186.0
  • Bit_score: 319
  • Evalue 3.00e-84
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO48273.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 186.0
  • Bit_score: 319
  • Evalue 2.50e-84
Sua5/YciO/YrdC/YwlC; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 186.0
  • Bit_score: 301
  • Evalue 1.60e-79
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGCGGGCGGGAGGCGTCATCGTTTACCCGACGGATTCGTGTTATGCGCTGGGCGGCCGGCTGGGGGACAAGCATGCGATGACGCGCATTCGAGCCATACGGCAGGTGGATGAGAACCACCATCTGACGTTGACGTGCCGCGACCTGTCTGAAATCTCCCACTACGCGAAAGTGAACAATACCCAGTACCGCCTGCTCAAGGCGACCACGCCCGGATGCTATACCTTCATACTTCAGGCCACGCGCGAAGTGCCACGCCGCTTGCAGCATCCCAGGCGCAACACTATCGGGTTGAGAGTTCCGGATAACCCGGTAGTGCAGGCCCTCCTTGCGGAACTGAATGAACCGCTGCTGAGCTCGACCCTGATATTGCCGGGGGAGGGGCTCCCCTTGAATGATGCAATGGAAATCCGGTCCCGGCTTGAGCATCACGTGGAATTGGTGCTGGATGGCGGAGCATGCGGGCTGGAGATGAGCACCGTGATCGATTTGACGGACGATTCGCCAGAATTGATACGTGCGGGCAAGGGCAGCCTGGCGCCTTTCGGAATTACCCATGAATAA
PROTEIN sequence
Length: 188
MRAGGVIVYPTDSCYALGGRLGDKHAMTRIRAIRQVDENHHLTLTCRDLSEISHYAKVNNTQYRLLKATTPGCYTFILQATREVPRRLQHPRRNTIGLRVPDNPVVQALLAELNEPLLSSTLILPGEGLPLNDAMEIRSRLEHHVELVLDGGACGLEMSTVIDLTDDSPELIRAGKGSLAPFGITHE*