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SCNpilot_expt_500_bf_scaffold_3235

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3235_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3..176
DNA (174bp) protein (58aa)
GTP cyclohydrolase subunit MoaC; K03637 molybdenum cofactor biosynthesis protein C id=12497724 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
GTP cyclohydrolase subunit MoaC; K03637 molybdenum cofactor biosynthesis protein C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_3235_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233..943
DNA (711bp) protein (237aa)
thiol-disulfide isomerase-like protein id=12497723 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
thiol-disulfide isomerase-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3235_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

940..1464
DNA (525bp) protein (175aa)
thiol-disulfide isomerase-like protein id=12497722 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
thiol-disulfide isomerase-like protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_3235_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1730..4606
DNA (2877bp) protein (959aa)
DMSO reductase subunit A; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-] id=12497721 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
DMSO reductase subunit A; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-]
DMSO reductase chain A {ECO:0000313|EMBL:AAZ96523.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_500_bf_scaffold_3235_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4642..5337
DNA (696bp) protein (232aa)
DMSO reductase subunit B id=12497720 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
DMSO reductase subunit B rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_3235_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5373..6311
DNA (939bp) protein (313aa)
DMSO reductase subunit C; K07308 anaerobic dimethyl sulfoxide reductase subunit C (DMSO reductase anchor subunit) id=12497719 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
DMSO reductase subunit C; K07308 anaerobic dimethyl sulfoxide reductase subunit C (DMSO reductase anchor subunit)
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_3235_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6503..6838
DNA (336bp) protein (112aa)
rhodanese-like protein id=12497718 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rhodanese-like protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_3235_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6961..7188
DNA (228bp) protein (76aa)
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] id=12497717 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3235_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7292..7639
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL88_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96528.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_500_bf_scaffold_3235_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7636..7752
DNA (117bp) protein (39aa)
hypothetical protein id=12497716 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3235_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7952..9247
DNA (1296bp) protein (432aa)
putative long-chain fatty acid transport protein id=12497667 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
putative long-chain fatty acid transport protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_3235_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9594..9839)
DNA (246bp) protein (82aa)
hypothetical protein id=12497666 bin=THIO_MID species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Conjugal transfer protein {ECO:0000313|EMBL:ETD47590.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3235_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9836..11122)
DNA (1287bp) protein (429aa)
TrbI-like protein n=11 Tax=Pseudomonas aeruginosa RepID=U8CD47_PSEAI rbh
Conjugative transfer protein TrbI {ECO:0000313|EMBL:ETD47589.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 rbh
SCNpilot_expt_500_bf_scaffold_3235_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11125..11598)
DNA (474bp) protein (158aa)
P-type conjugative transfer protein TrbG n=11 Tax=Pseudomonas aeruginosa RepID=U8CE56_PSEAI
Conjugative transfer protein TrbG {ECO:0000313|EMBL:ETD47588.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
P-type conjugative transfer protein TrbG
Displaying 14 items

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