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SCNpilot_expt_500_bf_scaffold_227

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_227_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..590
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369780E
group 1 glycosyl transferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_227_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

587..1432
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FABB3 rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_227_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1429..2805
DNA (1377bp) protein (459aa)
capsular polysaccharide biosynthesis protein CapK n=1 Tax=Thiobacillus thioparus RepID=UPI000362595A rbh
capsular polysaccharide biosynthesis protein CapK rbh
Possible capK protein {ECO:0000313|EMBL:AAZ96248.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_500_bf_scaffold_227_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2840..4216
DNA (1377bp) protein (459aa)
polymerase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D0C35
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_227_5
unknown

Not on your lists

comp(4029..4430)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_227_6
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5062..6495
DNA (1434bp) protein (478aa)
membrane bound O-acyl transferase, MBOAT family protein id=12498695 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
D-alanine export protein {ECO:0000313|EMBL:GAO34868.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
membrane bound O-acyl transferase, MBOAT family protein
SCNpilot_expt_500_bf_scaffold_227_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6517..8343)
DNA (1827bp) protein (609aa)
amidotransferase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] id=12498694 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
amidotransferase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_227_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8402..9394
DNA (993bp) protein (331aa)
hypothetical protein id=12498693 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_227_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10528..11457
DNA (930bp) protein (310aa)
glycosyl transferase n=1 Tax=Thiobacillus thioparus RepID=UPI000360DBE4 rbh
glycosyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_227_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11565..12533
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DD17A rbh
family 2 glycosyl transferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_227_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12700..13887
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003724D26 rbh
glycosyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_227_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13974..14423
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037EE5DC
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_227_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14407..14682
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037EE5DC
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_227_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14714..15487
DNA (774bp) protein (258aa)
TPR repeat-containing protein id=12494205 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
TPR repeat-containing protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ96257.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_500_bf_scaffold_227_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15488..16720)
DNA (1233bp) protein (411aa)
arylsulfatase n=1 Tax=Thiobacillus thioparus RepID=UPI000382C963
arylsulfatase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_227_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16666..17637)
DNA (972bp) protein (324aa)
arylsulfatase n=1 Tax=Thiobacillus thioparus RepID=UPI000382C963
arylsulfatase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_227_17
unknown

Not on your lists

18022..18498
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_227_18
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18435..19082)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378E3CF rbh
sulfotransferase
Tax=CG_Delta_03
SCNpilot_expt_500_bf_scaffold_227_19
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19356..20192)
DNA (837bp) protein (279aa)
Polysaccharide deacetylase id=12494203 bin=THIO_HI species=Desulfovibrio alkalitolerans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Polysaccharide deacetylase {ECO:0000313|EMBL:EPR30574.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
SCNpilot_expt_500_bf_scaffold_227_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20195..21121)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362FCEC
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AAZ96261.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_500_bf_scaffold_227_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21131..22099)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C573E rbh
family 2 glycosyl transferase rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_227_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22110..23039)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C3546 rbh
glycosyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_227_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23048..23842)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037367E0 rbh
putative polysaccharide deacetylase rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_227_24
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23878..24954)
DNA (1077bp) protein (359aa)
Lipopolysaccharide biosynthesis protein-like protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G407_GEOUR rbh
Lipopolysaccharide biosynthesis protein-like protein {ECO:0000313|EMBL:CDH43068.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
lipopolysaccharide biosynthesis protein-like protein rbh
SCNpilot_expt_500_bf_scaffold_227_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24954..26429)
DNA (1476bp) protein (492aa)
polysaccharide biosynthesis protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036600C7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_227_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26517..26990)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B75F0
type 11 methyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_227_27
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(26992..27216)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B75F0
Uncharacterized protein {ECO:0000313|EMBL:CCY23585.1}; TaxID=1262759 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
type 11 methyltransferase
SCNpilot_expt_500_bf_scaffold_227_28
unknown

Not on your lists

comp(27292..27387)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_227_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27455..28735)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036FE824 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_227_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28732..29514)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037920C6
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 79 in total

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