ggKbase home page

SCNpilot_expt_500_bf_scaffold_1878

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1878_1
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..461)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1EKZ8_AMPQE
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
SCNpilot_expt_500_bf_scaffold_1878_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

884..1381
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBDD8 rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_1878_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1378..2157
DNA (780bp) protein (260aa)
iron-sulfur cluster protein; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-]
4Fe-4S ferredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI000381CD7E rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_1878_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2164..3366
DNA (1203bp) protein (401aa)
molybdopterin oxidoreductase, membrane subunit; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] rbh
molybdopterin oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F5B96 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_1878_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3409..4827
DNA (1419bp) protein (473aa)
hydrogenobyrinic acid a,c-diamide synthase / cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-); K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] rbh
hydrogenase expression protein HypE n=1 Tax=Thiobacillus thioparus RepID=UPI00035C9F15 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_1878_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4846..5190
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036EDC73
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_1878_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5194..6633
DNA (1440bp) protein (480aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107); K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] rbh
sirohydrochlorin ferrochelatase n=1 Tax=Thiobacillus thioparus RepID=UPI00037E0442 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_1878_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6708..8414)
DNA (1707bp) protein (569aa)
sodium:proton antiporter n=1 Tax=Thiobacillus thioparus RepID=UPI000363A4E4 rbh
putative efflux pump/antiporter; K03455 monovalent cation:H+ antiporter-2, CPA2 family rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_1878_9
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8835..9416)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z2V5_9BACT
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
SCNpilot_expt_500_bf_scaffold_1878_10
unknown

Not on your lists

9664..10386
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1878_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10203..11000)
DNA (798bp) protein (266aa)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_1878_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11255..12097
DNA (843bp) protein (281aa)
pyruvate:ferredoxin (flavodoxin) oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-]
pyruvate-flavodoxin oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI00036026B7
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 12 items

View Taxonomy