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SCNpilot_expt_500_bf_scaffold_3508

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3508_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1166
DNA (1164bp) protein (388aa)
6-phosphofructokinase (EC:2.7.1.90); K00850 6-phosphofructokinase [EC:2.7.1.11] rbh
6-phosphofructokinase n=1 Tax=Thiobacillus thioparus RepID=UPI0003740863 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_3508_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1216..1461
DNA (246bp) protein (82aa)
hypothetical protein id=12493577 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3508_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1374..3032)
DNA (1659bp) protein (553aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ72276.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein id=1245417 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
SCNpilot_expt_500_bf_scaffold_3508_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3193..3516
DNA (324bp) protein (108aa)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003638A2B
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3508_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3612..3818
DNA (207bp) protein (69aa)
hypothetical protein id=12493575 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3508_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3884..4450
DNA (567bp) protein (189aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036626DA
outer membrane lipoprotein carrier protein LolA; K03634 outer membrane lipoprotein carrier protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3508_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4981..5994
DNA (1014bp) protein (338aa)
ATPase AAA n=1 Tax=Thiobacillus thioparus RepID=UPI00037041EC
recombination factor protein RarA; K07478 putative ATPase
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_3508_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6541..7134
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E7D76 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3508_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7232..7702
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D4ECF
hypothetical protein; K09004 hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3508_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7690..8280)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B7176 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3508_11
unknown

Not on your lists

8801..9379
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3508_12
unknown

Not on your lists

9773..10039
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3508_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10928..11929
DNA (1002bp) protein (334aa)
putative periplasmic protease; K04774 serine protease SohB [EC:3.4.21.-] id=12493565 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative periplasmic protease; K04774 serine protease SohB [EC:3.4.21.-] rbh
Serine protease SohB {ECO:0000313|EMBL:AAZ98582.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_500_bf_scaffold_3508_14
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12117..14480
DNA (2364bp) protein (788aa)
Type I site-specific deoxyribonuclease n=1 Tax=Thiocapsa marina 5811 RepID=F9U565_9GAMM rbh
helicase, type I site-specific restriction-modification system restriction subunit rbh
Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_expt_500_bf_scaffold_3508_15
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14483..15325
DNA (843bp) protein (281aa)
DNA-binding protein n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003B7AC77
hypothetical protein rbh
Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_expt_500_bf_scaffold_3508_16
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15329..15661
DNA (333bp) protein (111aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Thiocapsa marina 5811 RepID=F9U566_9GAMM
Tax=GWA2_Rhodocyclales_65_20_curated
Displaying 16 items

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