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SCNpilot_expt_500_bf_scaffold_3521

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3521_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65..946)
DNA (882bp) protein (294aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F7561 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3521_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(946..1734)
DNA (789bp) protein (263aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] rbh
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003682E1E rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3521_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1754..2908)
DNA (1155bp) protein (385aa)
deoxyadenosine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D27D8 rbh
deoxynucleoside kinase rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_3521_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2905..4296)
DNA (1392bp) protein (464aa)
poly(A) polymerase, PcnB; K00970 poly(A) polymerase [EC:2.7.7.19] rbh
poly(A) polymerase n=1 Tax=Thiobacillus thioparus RepID=UPI0003638918 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3521_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4336..5070)
DNA (735bp) protein (245aa)
putative Fe3+-siderophores transport system ATPase; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] rbh
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003640DFD rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3521_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5067..5588)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037D916A
putative transmembrane ABC transporter permease; K02015 iron complex transport system permease protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3521_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5940..6617)
DNA (678bp) protein (226aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K01802 peptidylprolyl isomerase [EC:5.2.1.8] rbh
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DC3E3 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3521_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6666..7298)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FD87A rbh
hypothetical protein; K07396 putative protein-disulfide isomerase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_3521_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7349..7525)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037046A4
cytochrome oxidase maturation protein cbb3-type
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3521_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7565..10036)
DNA (2472bp) protein (824aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
cation transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000361CD63 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_3521_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10115..10690)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376063F rbh
OmpW family protein; K07275 outer membrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3521_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10796..11509
DNA (714bp) protein (238aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6] rbh
leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Thiobacillus thioparus RepID=UPI000377DBB9 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_3521_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11716..12438
DNA (723bp) protein (241aa)
arginyl-tRNA-protein transferase (EC:2.3.2.8); K00685 arginine-tRNA-protein transferase [EC:2.3.2.8] rbh
arginyl-tRNA-protein transferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037970E0 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_3521_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12435..12917
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D4E61
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 14 items

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