ggKbase home page

SCNpilot_expt_500_bf_scaffold_2534

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2534_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2..673)
DNA (672bp) protein (224aa)
30S ribosomal protein S1 n=1 Tax=Thiobacillus thioparus RepID=UPI000367D4A3
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_500_bf_scaffold_2534_2
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(794..2746)
DNA (1953bp) protein (651aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240533};; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2E2_9RHOO rbh
aroO; bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase rbh
SCNpilot_expt_500_bf_scaffold_2534_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2746..3612)
DNA (867bp) protein (289aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] rbh
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369C072 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_2534_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3609..4703)
DNA (1095bp) protein (365aa)
histidinol-phosphate aminotransferase (EC:2.6.1.-); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
histidinol-phosphate aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000365F667 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_2534_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4703..5797)
DNA (1095bp) protein (365aa)
chorismate mutase / prephenate dehydratase (EC:4.2.1.51 5.4.99.5); K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] rbh
prephenate dehydratase n=1 Tax=Thiobacillus thioparus RepID=UPI00036136EF rbh
Chorismate mutase {ECO:0000313|EMBL:AAZ96904.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_500_bf_scaffold_2534_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5794..6969)
DNA (1176bp) protein (392aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
3-phosphoglycerate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CE5FD rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_500_bf_scaffold_2534_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6962..8041)
DNA (1080bp) protein (360aa)
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] rbh
MFS transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B9C1D rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_2534_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8055..10133)
DNA (2079bp) protein (693aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Thiobacillus thioparus RepID=UPI00037C9D65
SCNpilot_expt_500_bf_scaffold_2534_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10665..11984
DNA (1320bp) protein (440aa)
N-ethylammeline chlorohydrolase; K05394 atrazine chlorohydrolase [EC:3.8.1.8] rbh
N-ethylammeline chlorohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FB450 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_2534_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11987..12685
DNA (699bp) protein (233aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] rbh
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037FC44D rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_2534_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12690..13358
DNA (669bp) protein (223aa)
putative 2-phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
phosphoglycolate phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI0003769125 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_500_bf_scaffold_2534_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13304..13684
DNA (381bp) protein (127aa)
invasion gene expression up-regulator, SirB n=1 Tax=Thiobacillus thioparus RepID=UPI00036AB366
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 12 items

View Taxonomy