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SCNpilot_expt_500_bf_scaffold_16994_1

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: comp(2..1579)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbE n=1 Tax=Thiobacillus denitrificans RepID=UPI000365D4CA similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 526.0
  • Bit_score: 1026
  • Evalue 0.0
Conjugal transfer protein TrbE {ECO:0000313|EMBL:AJP47674.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 525.0
  • Bit_score: 1023
  • Evalue 9.80e-296
trbE1; conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 525.0
  • Bit_score: 933
  • Evalue 3.90e-269

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Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1578
ATGATGCACCTCGCCGAATACCGCAAGCGCCCCGCGTTACTGGCCGACTGGCTGCCCTGGGCCGGACTGGTCGCGCCCGGCGTCGTGTTGAACAAGGATGGTTCGTTTCAGCGCACGGCACGCTTTCGCGGGCCGGATCTGGACAGCGCGACACAGGGCGAACTGGTCGCGACCTCGGCGCGGCTGAACAATGCGCTGCGCCGGCTTGGTTCGGGCTGGGCACTGTTCGTCGAGGCCGATCGGCGCGAAGCGGCGGACTATCCGGATTCCACGTTCCCCGAGCCACTGTCCTGGCTGGTCGATGAAGAGCGCCGCGCCGCGTTCGAGGAGGCCGATAGCCACTTCGAGAGCGCGTACCACCTGACGCTGCTGTACCTGCCACCCGAGGAATCGACGGCCCGCGCCGCGAAGCTGCTGTACGAGAACAGCAAGGTCGAAGGCGTGGATTGGCGCGAGCGGCTGGAGGGCTTCGTGTCGGAGACCGAACGCGTCTTCGGCCTGCTTGAAGGGGTGATGCCGGAGATCGCCTGGCTCGACGATGGTCAGACCCTGACCTACCTGCATGCCTGCGTATCCACCCGTCGGCATCCGGTGGCGGTGCCCGAGGTGCCGATGCACCTTGATGCGCTGCTGGCCGATGAGCCATTGACGGGTGGCCTCGCACCGATGCTCGGGAGCCAACATCTGCGCGTGGTGTCAGTGCGTGGCTTCCCGACCTCGACCTGGCCGGGTCTGCTCGACGACCTCAACCGCTTGGGCTTTGCCTACCGCTGGAGCACACGCTTTTTGTGCCTCGACAAGGCCGAGGCCGAGCGCGAGTTGGGACGCTTGCGCCGCCAGTGGTTCGCCAAGCGCAAGAACATCATGGCGCTGCTGCGCGAGACCATCTTTCAGCAGGAGAGCCAGCTGGTCGATTCCGATGCGTCGAACAAGGCGTCCGATGCCGATGCCGCTTTGCAGGAACTGGGCAGCGATCAGGTTTCGTTCGGCTACGTCACGGCCACCGTCACCGTGCTCGACTCCGACGCGACCGCTGCCGACGAGAAGCTGCGCGCGGTGGAGCGAACCATTCAGGGCCGTGGCTTCGTGACGATCCCCGAGACCTTGAATGCGGTCGATGCCTGGCTGTCATCGATTCCGGGACACGCCTATGCCAACGTGCGCCAGCCCATCGTCTCGACCCTGAACCTCGCGCACATGATGCCGGTCTCCGCCGTGTGGGCCGGGCAGGAGCGTAATGCGCACCTCGACGGCCCGCCGCTGATCGTGACGCGCACCGATGGCGCGACGCCGTTCCGGCTGGTCACGCACATCGGCGACGTCGGCAACACGCTGGTGGTCGGCCCCATCGGCATGGGCAAATCGGTGTTGCTCGCGACGCTGGCCTTGCAGTTCCGCCGCTATGCCGGATCGCGCATCTTCGCCTTCGACATGGGGCGTTCGATTCGCGCCACCGTGCTGGGGCTCGGCGGCGAGCACTACGACCTGGGCGCGGACGGCGCCATCGCCTTCCAGCCGCTGGCCCGCATCGACCAGGACAGCTACCGGGCGTGGGCGGCCGAGTGGATCCAGGGCCTG
PROTEIN sequence
Length: 526
MMHLAEYRKRPALLADWLPWAGLVAPGVVLNKDGSFQRTARFRGPDLDSATQGELVATSARLNNALRRLGSGWALFVEADRREAADYPDSTFPEPLSWLVDEERRAAFEEADSHFESAYHLTLLYLPPEESTARAAKLLYENSKVEGVDWRERLEGFVSETERVFGLLEGVMPEIAWLDDGQTLTYLHACVSTRRHPVAVPEVPMHLDALLADEPLTGGLAPMLGSQHLRVVSVRGFPTSTWPGLLDDLNRLGFAYRWSTRFLCLDKAEAERELGRLRRQWFAKRKNIMALLRETIFQQESQLVDSDASNKASDADAALQELGSDQVSFGYVTATVTVLDSDATAADEKLRAVERTIQGRGFVTIPETLNAVDAWLSSIPGHAYANVRQPIVSTLNLAHMMPVSAVWAGQERNAHLDGPPLIVTRTDGATPFRLVTHIGDVGNTLVVGPIGMGKSVLLATLALQFRRYAGSRIFAFDMGRSIRATVLGLGGEHYDLGADGAIAFQPLARIDQDSYRAWAAEWIQGL