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SCNpilot_expt_500_bf_scaffold_29818_1

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: comp(2..1741)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9 id=12498577 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 321.0
  • Bit_score: 576
  • Evalue 3.20e-161
p-type conjugative transfer protein trbg; K03204 type IV secretion system protein VirB9 similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 301.0
  • Bit_score: 495
  • Evalue 2.30e-137
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 620.0
  • Bit_score: 687
  • Evalue 1.40e-194

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGAAAGCCCCAATCCGCAATTCCGTATTGCCGCTGATCCTGAGTGCCACCCTGGCAACCCTCACCGGCTGCGCCACGCACGGCAAACCGCCGCCGGACATCACGTTGGACGTACCCATGGCGGCACACGCGCTGCCGGAGCCGCCCAGGCCCATTGAGGTGGTCGAGGTACCCAAACCCCTGCCGCTACCCGGGCAGTTGAAGCCTTTGGGTGATACGCCCGATGACAAGCCAGTCGCCGAAGCGCCCGACGAGAAGGCAGATGTGGCGCGCGCCAACGCCGACGCGCGCGTGCCCCCCAGTCGAGAGGGTTACGTCAACGCGATCCAGGTCTGGCCCTACAGCGATGGCGCGCTGTATCAGCTCTACACCAGTCCCGGTCGCGTCACCGTCATCACCTTGCAGCAGGGTGAAGAGCTGGTGACGGTCTCGGCCGGCGATACGGTGCGCTGGATCGTCGGCGACACGACCAGCGGCGCGGGTGCCGGTCTGCGCGTGAACATCCTCGTGAAGCCCACGCGCGTCGGCCTGAAGACCAATCTGGTCATCACCACCAACCGTCGCACCTACCTGCTCGAATTGTCGTCGACGCCGCAGGCGTGGATGGCCTCCGCCTCGTGGGATTACCCGAAGGACCGCATGCTGGCATTGCAGAAACGGGCACAGCAGGCCCAGGCGACAGCGCCGGTGGACTCGGGCTTGTCGCTGCAACAGATCAGGTTCCGTTACGCGATCAGTGGCGACAGCCCGCCTTGGAAGCCGCTGCGCGCGTTCGATGACGGCGAGCGCGTCTATATCCAGTTCCCCGCCGGCATCGCCCAGGGCGAGCTGCCGCCGCTATTCGTGATCGGGCAGCAGGGCGATGGCCAGCTCGTCAACTACCGCTTCCGCTCGCCCTACTACGTTGTGGATCGGCTGTTCGGTGCGGCAGAGTTGCGGCTGGGCGCGGACGCGGAGGCATTGAGCATGAGCACGCCCGCGATGCCACAATCTCCACCGGCCTGGACGAGTAAGGTCGATCCGGATACCTTGAGTCTGCGCGCGCCGCCGCGTCCGGTCACGCGGCTCAACCGGCGCCTGCTGGCCGTGCTCGCGGGAACACTGGGCGCGATCATCCTGGGGGCCACGCTATGGTCCTTGCAACCGCACAAGCGCGAACGCAACCCAGCCACCGAGCTGTACAACGTGGATCGCGTCTCACGGGCCGATAGCCTCGACCAATTGCCCAAGGACTATACCAAAGTGGTGCCAATGGTTAAGCCTGAGGTGCCGGTGTTGGGTGAGCCGTTGCCCGGTGACCTGGGGCCGGCCATCGTGCATGCGCAGAACCACGGGAACACGGGCGCGTACACCCCCGCGCAACCCGGTCGCATCGCACAGCCGGGCGATGCCGAGGATGCGGCGCGTTCGTCGGTGTTCTTCCGCAGCAGTAGTGCAACAAAGGCGGCACCGGCAACCACCGTAGCCGCAATCCAGCCCGAGCAGGCATCGGGCAATCAAGCCTTCAATCCGATGGCTTCGATATTGGCACAACTAACCGATCCGATGGCTGCGCAGAATCGGCAGGAGCAGAAGCAGGCGTTTGTCGCCAATGGCGTCGATACGACCACCCGCAATCCTGCCCGCCTGCAACTACCAGCCTCGCCCTACCAAGTGATGGCGGGCACCATCATTCCGGCGGCGCTGGTGACGGGCATCAACTCCGACCTGCCGGGGCAGGTCATCGCCAATGTCACCGAG
PROTEIN sequence
Length: 580
MKAPIRNSVLPLILSATLATLTGCATHGKPPPDITLDVPMAAHALPEPPRPIEVVEVPKPLPLPGQLKPLGDTPDDKPVAEAPDEKADVARANADARVPPSREGYVNAIQVWPYSDGALYQLYTSPGRVTVITLQQGEELVTVSAGDTVRWIVGDTTSGAGAGLRVNILVKPTRVGLKTNLVITTNRRTYLLELSSTPQAWMASASWDYPKDRMLALQKRAQQAQATAPVDSGLSLQQIRFRYAISGDSPPWKPLRAFDDGERVYIQFPAGIAQGELPPLFVIGQQGDGQLVNYRFRSPYYVVDRLFGAAELRLGADAEALSMSTPAMPQSPPAWTSKVDPDTLSLRAPPRPVTRLNRRLLAVLAGTLGAIILGATLWSLQPHKRERNPATELYNVDRVSRADSLDQLPKDYTKVVPMVKPEVPVLGEPLPGDLGPAIVHAQNHGNTGAYTPAQPGRIAQPGDAEDAARSSVFFRSSSATKAAPATTVAAIQPEQASGNQAFNPMASILAQLTDPMAAQNRQEQKQAFVANGVDTTTRNPARLQLPASPYQVMAGTIIPAALVTGINSDLPGQVIANVTE