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SCNpilot_expt_500_bf_scaffold_29818_2

Organism: scnpilot_expt_500_bf_thiobacillus1

near complete RP 49 / 55 MC: 4 BSCG 49 / 51 MC: 7 ASCG 12 / 38 MC: 2
Location: comp(1738..1863)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbF n=1 Tax=Thiobacillus denitrificans RepID=UPI000365D7A3 similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 40.0
  • Bit_score: 84
  • Evalue 2.80e-14
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AJP47671.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 40.0
  • Bit_score: 77
  • Evalue 6.30e-12
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 40.0
  • Bit_score: 75
  • Evalue 5.40e-12

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Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 126
CTGTCCATCGTGCTGCAACCGCCGCGCACCGAAGAGCGACTGCGCAAGAACCCGCTGGGCATTTATGTCAACGGCCTGTCCTGGAGCCGTGAATTCGACACAACCGAAGGAACCCCGAAATCATGA
PROTEIN sequence
Length: 42
LSIVLQPPRTEERLRKNPLGIYVNGLSWSREFDTTEGTPKS*