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SCNpilot_expt_500_bf_scaffold_485

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_485_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..690)
DNA (690bp) protein (230aa)
preprotein translocase subunit SecA n=1 Tax=Microbacterium sp. B19 RepID=UPI000346D1D2
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

872..2182
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345FD3C rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ73487.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_3
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2242..2904)
DNA (663bp) protein (221aa)
RNA polymerase subunit sigma-54 n=1 Tax=Microbacterium sp. B19 RepID=UPI000348D399 rbh
RNA polymerase subunit sigma-54 {ECO:0000313|EMBL:KEP75703.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
ribosome-associated protein Y (PSrp-1) rbh
SCNpilot_expt_500_bf_scaffold_485_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2999..3682)
DNA (684bp) protein (228aa)
amidophosphoribosyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CD3AD rbh
amidophosphoribosyltransferase
Predicted amidophosphoribosyltransferase {ECO:0000313|EMBL:BAJ73489.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_5
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3776..5434)
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000349E578 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEP75704.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_485_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5431..7116)
DNA (1686bp) protein (562aa)
signal transduction histidine kinase; K07654 two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
histidine kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349B71F rbh
SCNpilot_expt_500_bf_scaffold_485_7
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7124..7804)
DNA (681bp) protein (227aa)
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CA5AF rbh
Transcriptional regulator {ECO:0000313|EMBL:KEP75706.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
mtrA; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07670 two-component system, OmpR family, response regulator MtrA rbh
SCNpilot_expt_500_bf_scaffold_485_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7965..9248
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBN4_MICTS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ73494.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9245..9916
DNA (672bp) protein (224aa)
membrane protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CFE14 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73495.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9913..11079
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBN6_MICTS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ73496.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11076..12104
DNA (1029bp) protein (343aa)
MoxR-like ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
ATPase AAA n=1 Tax=Microbacterium sp. B19 RepID=UPI0003494344 rbh
MoxR-like ATPase {ECO:0000313|EMBL:BAJ73497.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12104..13405
DNA (1302bp) protein (434aa)
Uncharacterized conserved protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBN8_MICTS rbh
hypothetical protein rbh
Uncharacterized conserved protein {ECO:0000313|EMBL:BAJ73498.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13551..14573
DNA (1023bp) protein (341aa)
fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] rbh
3-oxoacyl-ACP synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B396B5 rbh
3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000313|EMBL:BAJ73499.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14570..17212
DNA (2643bp) protein (881aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBP0_MICTS rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:BAJ73500.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II rbh
SCNpilot_expt_500_bf_scaffold_485_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17209..18168
DNA (960bp) protein (320aa)
nucleoside-diphosphate sugar epimerase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5DFB6 rbh
nucleoside-diphosphate-sugar epimerase rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:BAJ73501.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18347..20605)
DNA (2259bp) protein (753aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
catalase; K03782 catalase-peroxidase [EC:1.11.1.21] rbh
catalase/hydroperoxidase HPI(I) n=1 Tax=Microbacterium sp. B19 RepID=UPI00034ACCE7 rbh
SCNpilot_expt_500_bf_scaffold_485_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20602..21063)
DNA (462bp) protein (154aa)
Fur family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003476E08 rbh
fur; Fe2+/Zn2+ uptake regulation proteins; K03711 Fur family transcriptional regulator, ferric uptake regulator
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:BAJ73503.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21134..22129)
DNA (996bp) protein (332aa)
membrane protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B3F317 rbh
hypothetical protein rbh
Uncharacterized membrane protein {ECO:0000313|EMBL:BAJ73504.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22146..22979
DNA (834bp) protein (278aa)
Predicted membrane protein/domain n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBP5_MICTS rbh
hypothetical protein rbh
Predicted membrane protein/domain {ECO:0000313|EMBL:BAJ73505.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_20
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23051..23257)
DNA (207bp) protein (69aa)
alcohol dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B2EC98
hypothetical protein
Alcohol dehydrogenase {ECO:0000313|EMBL:KEP74315.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SCNpilot_expt_500_bf_scaffold_485_21
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23360..23791
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345D10D
Uncharacterized protein {ECO:0000313|EMBL:KEP74314.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_485_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23638..25161)
DNA (1524bp) protein (508aa)
Large extracellular alpha-helical protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBP8_MICTS rbh
large extracellular alpha-helical protein rbh
Large extracellular alpha-helical protein {ECO:0000313|EMBL:BAJ73508.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_23
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25158..27995)
DNA (2838bp) protein (946aa)
glycosyl transferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B91C4 rbh
Predicted glycosyltransferase {ECO:0000313|EMBL:BAJ73509.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
glycosyltransferase rbh
SCNpilot_expt_500_bf_scaffold_485_24
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28089..28412)
DNA (324bp) protein (108aa)
transcription factor WhiB n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D90C3
WhiB family transcriptional regulator
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_25
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28552..29712)
DNA (1161bp) protein (387aa)
phosphomannose isomerase; K01809 mannose-6-phosphate isomerase [EC:5.3.1.8] rbh
phosphomannose isomerase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D69EF rbh
Phosphomannose isomerase {ECO:0000313|EMBL:BAJ73511.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_26
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29776..31176
DNA (1401bp) protein (467aa)
ligase n=1 Tax=Microbacterium sp. B19 RepID=UPI000344C431 rbh
lipid A core - O-antigen ligase rbh
Lipid A core-O-antigen ligase {ECO:0000313|EMBL:BAJ73512.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_27
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31173..32504
DNA (1332bp) protein (444aa)
Lipid A core-O-antigen ligase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBQ3_MICTS rbh
lipid A core - O-antigen ligase rbh
Lipid A core-O-antigen ligase {ECO:0000313|EMBL:BAJ73513.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_28
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32553..34463
DNA (1911bp) protein (637aa)
Predicted glycosyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBQ4_MICTS rbh
Predicted glycosyltransferase {ECO:0000313|EMBL:BAJ73514.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
glycosyltransferase rbh
SCNpilot_expt_500_bf_scaffold_485_29
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34460..35431
DNA (972bp) protein (324aa)
glycosyl transferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6A967 rbh
glycosyltransferase rbh
Predicted glycosyltransferase {ECO:0000313|EMBL:BAJ73515.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_485_30
unknown

Not on your lists

comp(35505..35870)
DNA (366bp) protein (122aa)

This feature has no annotations

Displaying items 1-30 of 104 in total

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