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SCNpilot_expt_500_bf_scaffold_2167

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2167_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..2149
DNA (2148bp) protein (716aa)
protease II; K01354 oligopeptidase B [EC:3.4.21.83] rbh
protease n=1 Tax=Microbacterium sp. B19 RepID=UPI0003469A6C rbh
Protease II {ECO:0000313|EMBL:BAJ73319.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2167_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2309..3169
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000377B0DF
Uncharacterized protein {ECO:0000313|EMBL:KJL41385.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
superfamily I DNA and RNA helicase and helicase subunits
SCNpilot_expt_500_bf_scaffold_2167_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3269..4297)
DNA (1029bp) protein (343aa)
pfkA; 6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11] rbh
6-phosphofructokinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA87_MICTS rbh
6-phosphofructokinase {ECO:0000313|EMBL:BAJ73321.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2167_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4392..5456)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA88_MICTS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ73322.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2167_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5532..7688)
DNA (2157bp) protein (719aa)
Superfamily II DNA/RNA helicase, SNF2 family n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA89_MICTS rbh
superfamily II DNA/RNA helicase, SNF2 family rbh
Superfamily II DNA/RNA helicase, SNF2 family {ECO:0000313|EMBL:BAJ73323.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2167_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7932..9299
DNA (1368bp) protein (456aa)
Permease of the major facilitator superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA92_MICTS rbh
permease of the major facilitator superfamily rbh
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ73326.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2167_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9333..9605)
DNA (273bp) protein (91aa)
FAD synthase; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
FAD synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA93_MICTS
SCNpilot_expt_500_bf_scaffold_2167_8
unknown

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9746..10294
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2167_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10219..10638)
DNA (420bp) protein (140aa)
membrane protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003490091
DNA uptake lipoprotein
DNA uptake lipoprotein {ECO:0000313|EMBL:BAJ73328.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2167_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10684..11052)
DNA (369bp) protein (123aa)
membrane protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003462F8F
glycogen synthase
Glycogen synthase {ECO:0000313|EMBL:BAJ73329.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2167_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11049..11942)
DNA (894bp) protein (298aa)
pseudouridine synthase; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] rbh
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB0
tRNA pseudouridine synthase B n=1 Tax=Microbacterium sp. B19 RepID=UPI000347A30A rbh
SCNpilot_expt_500_bf_scaffold_2167_12
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11942..12445)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D2894
Uncharacterized protein {ECO:0000313|EMBL:KEP75007.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
GTPase
SCNpilot_expt_500_bf_scaffold_2167_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12746..13612
DNA (867bp) protein (289aa)
nth; A/G-specific DNA glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] rbh
adenine glycosylase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034778E5 rbh
A/G-specific DNA glycosylase {ECO:0000313|EMBL:BAJ73332.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2167_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13730..14281)
DNA (552bp) protein (184aa)
abortive phage infection protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000347E91E rbh
metal-dependent membrane protease
Predicted metal-dependent membrane protease {ECO:0000313|EMBL:BAJ73333.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2167_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14895..15353)
DNA (459bp) protein (153aa)
Ribosome-binding factor A n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAA0_MICTS
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_2167_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15552..15848)
DNA (297bp) protein (99aa)
Translation initiation factor IF-2 (Fragment) n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BE67_9MICO
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
infB; translation initiation factor 2 (IF-2; GTPase); K02519 translation initiation factor IF-2
Displaying 16 items

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