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SCNpilot_expt_500_bf_scaffold_257_9

Organism: SCNPILOT_CONT_300_BF_Microbacterium_72_41

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(12571..13101)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B5C75 similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 176.0
  • Bit_score: 327
  • Evalue 1.00e-86
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KEP76057.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 177.0
  • Bit_score: 294
  • Evalue 1.10e-76
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 175.0
  • Bit_score: 284
  • Evalue 3.20e-74

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GTGGAAGATGACGACGCCGGGCTGTGGGTCCGGGTGCGCCAGGGGGATGAGCTTGCGCTCGCCGGGTTGTTCGATCGGTACGAGGGGCGGTTGTTCCGGCATGCGTCGCGGTTGTTGACGCATCGGGAGGATGCGAAGGACGCCGTGACGGTGGCGTTCTTCGAGTTGTGGCGCAAGCGTGCGTCGGTGCGGCTGGTGGATGGGTCGCCGCTGCCGTGGTTGGTGAACACGGTGGCGCACTGCGCACGGAACCTGGAGCGGTCGGGGCGTCGGTATCGGGCGTTGCTCGATCGGGCACCGGCGGCGGAGCCGACGTCGCATGATCTGGACGACAGCGGCGTGTTGGCGGCGTTGAAGCGTCTGCCGGAGCGGGAGCAGTCGGTGATCGTGCTGTCGGTGCTGGAGGGGTACTCCGAGCGCGAGGTCGCCGAGGCTCTCGGCGTCCCCGCGGGCACGGTGAAGTCCCGTCTGTCGCGGGCGAAGGCCCGGTTGCGTGAGGATCTTTCGTCCCTGGAAGGGGCACGGGCATGA
PROTEIN sequence
Length: 177
VEDDDAGLWVRVRQGDELALAGLFDRYEGRLFRHASRLLTHREDAKDAVTVAFFELWRKRASVRLVDGSPLPWLVNTVAHCARNLERSGRRYRALLDRAPAAEPTSHDLDDSGVLAALKRLPEREQSVIVLSVLEGYSEREVAEALGVPAGTVKSRLSRAKARLREDLSSLEGARA*