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SCNpilot_expt_500_bf_scaffold_257

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_257_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..908)
DNA (906bp) protein (302aa)
translation initiation factor IF-2, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B3C041
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
infB; translation initiation factor 2 (IF-2; GTPase); K02519 translation initiation factor IF-2
SCNpilot_expt_500_bf_scaffold_257_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2340..3329)
DNA (990bp) protein (330aa)
transcription elongation factor NusA n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B56D1 rbh
nusA; transcription elongation factor; K02600 N utilization substance protein A rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3381..4022)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAA3_MICTS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ73337.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4165..6759)
DNA (2595bp) protein (865aa)
glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1] rbh
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
glycogen phosphorylase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C5EAE rbh
SCNpilot_expt_500_bf_scaffold_257_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6768..8606)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAA5_MICTS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ73339.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8644..9465)
DNA (822bp) protein (274aa)
oxidoreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B2F451 rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:BAJ73341.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9641..11443)
DNA (1803bp) protein (601aa)
proS; prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] rbh
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
prolyl-tRNA synthetase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B64CD9 rbh
SCNpilot_expt_500_bf_scaffold_257_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11471..12574)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAA9_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73343.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_9
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12571..13101)
DNA (531bp) protein (177aa)
RNA polymerase sigma factor n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B5C75 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEP76057.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_500_bf_scaffold_257_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13207..14031
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CEA48 rbh
NADH:ubiquinone oxidoreductase subunit 4 (chain M)
NADH:ubiquinone oxidoreductase subunit 4 (Chain M) {ECO:0000313|EMBL:BAJ73347.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14028..14666
DNA (639bp) protein (213aa)
pyrrolidone-carboxylate peptidase; K01304 pyroglutamyl-peptidase [EC:3.4.19.3]
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
peptidase C15 n=1 Tax=Microbacterium sp. B19 RepID=UPI0003490289 rbh
SCNpilot_expt_500_bf_scaffold_257_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14673..15866)
DNA (1194bp) protein (398aa)
benzoate transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI00034697F1 rbh
hypothetical protein; K05782 benzoate membrane transport protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ73349.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15933..17084)
DNA (1152bp) protein (384aa)
ispG; hypothetical protein; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI000344D835 rbh
SCNpilot_expt_500_bf_scaffold_257_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17289..19190
DNA (1902bp) protein (634aa)
anthranilate/para-aminobenzoate synthase component I; K13063 phenazine biosynthesis protein phzE [EC:2.6.1.86] rbh
anthranilate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BC307 rbh
Anthranilate/para-aminobenzoate synthase component I {ECO:0000313|EMBL:BAJ73352.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19253..20569)
DNA (1317bp) protein (439aa)
membrane-associated Zn-dependent protease 1; K01417 [EC:3.4.24.-] rbh
Predicted membrane-associated Zn-dependent protease 1 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAB9_MICTS rbh
Predicted membrane-associated Zn-dependent protease 1 {ECO:0000313|EMBL:BAJ73353.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20648..22315
DNA (1668bp) protein (556aa)
UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] rbh
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAC0_MICTS rbh
SCNpilot_expt_500_bf_scaffold_257_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22367..23449)
DNA (1083bp) protein (361aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteriu
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CBEA9 rbh
SCNpilot_expt_500_bf_scaffold_257_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23459..24424)
DNA (966bp) protein (322aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
FKBP-type peptidyl-prolyl cis-trans isomerase 1; K01802 peptidylprolyl isomerase [EC:5.2.1.8] rbh
peptidyl-prolyl cis-trans isomerase, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B32782 rbh
SCNpilot_expt_500_bf_scaffold_257_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24583..25284
DNA (702bp) protein (234aa)
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAC4_MICTS rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:BAJ73358.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_20
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25412..26407
DNA (996bp) protein (332aa)
dhaK; dihydroxyacetone kinase; K05878 dihydroxyacetone kinase, N-terminal domain [EC:2.7.1.-] rbh
Dihydroxyacetone kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAC5_MICTS rbh
Dihydroxyacetone kinase {ECO:0000313|EMBL:BAJ73359.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26404..27039
DNA (636bp) protein (212aa)
dihydroxyacetone kinase; K05879 dihydroxyacetone kinase, C-terminal domain [EC:2.7.1.-] rbh
dihydroxyacetone kinase subunit DhaL n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B3F420 rbh
Dihydroxyacetone kinase {ECO:0000313|EMBL:BAJ73360.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_22
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27036..27761
DNA (726bp) protein (242aa)
dihydroxyacetone kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000347806C rbh
Uncharacterized protein {ECO:0000313|EMBL:KEP74470.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein; K05881 PTS hybrid protein rbh
SCNpilot_expt_500_bf_scaffold_257_23
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27776..28741)
DNA (966bp) protein (322aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000347016B rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:BAJ73362.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_24
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28852..30570
DNA (1719bp) protein (573aa)
glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] rbh
FAD-dependent oxidoreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D1626 rbh
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:BAJ73363.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_25
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30643..31446
DNA (804bp) protein (268aa)
glycerol transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DDE91 rbh
glycerol uptake facilitator; K02440 glycerol uptake facilitator protein rbh
Glycerol uptake facilitator {ECO:0000313|EMBL:BAJ73364.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_26
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31533..33044
DNA (1512bp) protein (504aa)
glpK; glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30] rbh
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
glycerol kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034964FA rbh
SCNpilot_expt_500_bf_scaffold_257_27
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33133..33612)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A01F0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73366.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_28
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33641..34120)
DNA (480bp) protein (160aa)
peroxiredoxin n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B547FC rbh
redox protein, regulator of disulfide bond formation
Predicted redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:BAJ73367.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_29
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34167..35150
DNA (984bp) protein (328aa)
L-asparaginase II n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AED9A rbh
ansA; L-asparaginase II rbh
L-asparaginase II {ECO:0000313|EMBL:BAJ73368.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_500_bf_scaffold_257_30
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35227..36759)
DNA (1533bp) protein (511aa)
Amino acid transporters n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAD5_MICTS rbh
amino acid transporters rbh
Amino acid transporters {ECO:0000313|EMBL:BAJ73369.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying items 1-30 of 128 in total

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