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SCNpilot_expt_500_bf_scaffold_257_17

Organism: SCNPILOT_CONT_300_BF_Microbacterium_72_41

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: comp(22367..23449)

Top 3 Functional Annotations

Value Algorithm Source
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 359.0
  • Bit_score: 628
  • Evalue 1.40e-177
  • rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 359.0
  • Bit_score: 628
  • Evalue 6.30e-177
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CBEA9 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 360.0
  • Bit_score: 667
  • Evalue 8.70e-189
  • rbh

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGCGTCGCGTCGTCATCCTCGGCTCCACCGGTTCGATCGGCACCCAGGCGCTCGACGTCATCCGCGCCAACCCCGACCGCTTCGAAGTGGTGGGACTGGCCGCGGGGACGGACCGCGCCGGCGTCGATGCCCAGGCTGCAGAGTTCGGGGTCGACGACATCGCCCTGGGCGCCGTCGAGGCCGAGCAGCTCGTCCGCGACATCCCCGCCGACGTGGTGCTCAACGGCATCACGGGATCGGTGGGACTCGGCCCCACCCTCGCGGCGCTCGAGGCGGGTCGCACCCTCGCTCTGGCGAACAAGGAGTCGTTGATCGTCGGTGGCGCCCTCGTCACACGGCTCGCGGCCCCCGGGCAGATCGTGCCGGTCGACTCCGAGCACTCCGCCATCGCGCAGGCGCTGCGGTCGGGCGAACCCGACGAGGTGCGACGACTCGTCCTCACCGCATCCGGTGGGCCCTTCCGGGGGCGCTCGAGAGACGACCTCGCCGATGTCACGCCGGCGCAGGCGCTCGCGCACCCGACGTGGGACATGGGGCGGGTCGTCACGACCAACTCCGCCACCCTGGTGAACAAGGGTCTCGAGGTGATCGAGGCGCACCTGCTGTTCGATGTGCCGTACGAGCGCATCGACGTCGTCGTGCATCCCCAGTCGATCGTGCACTCGATGGTCGAGTTCCTCGACGGATCGACCATCGCGCAGGCGTCGCCGCCCGACATGCGCCTCCCCATCTCGCTGGGCCTCGACTGGCCCCACCGGATCTCGGGCGTCGGGGTGCCGCTGGACTGGACGACCGCGACGCAGTGGACGTTCGAGCCGCTCGACGAGAAGGCGTTCGGCTCCGTCGCCCTGGCCAAGCGCGTCGGGCGCGCCGGGGGCACCTACCCCGCGGTGTTCAACGCCGCGAACGAGCAGGCGGTGGACGCGTTCCACGAGGGGCGTCTGAGCTTCCTCGGCATCGTCGAGGTCATCGAGAGGGTCGTGGAGCGGCACGAGGCTCCCGCGTCGCTCACCCGCGAGTCGCTCGCGGAGGCGGAGTCCTGGGCCCGGCGCACGGCCGACGCGGTCATCGCCGCGCTCTGA
PROTEIN sequence
Length: 361
MRRVVILGSTGSIGTQALDVIRANPDRFEVVGLAAGTDRAGVDAQAAEFGVDDIALGAVEAEQLVRDIPADVVLNGITGSVGLGPTLAALEAGRTLALANKESLIVGGALVTRLAAPGQIVPVDSEHSAIAQALRSGEPDEVRRLVLTASGGPFRGRSRDDLADVTPAQALAHPTWDMGRVVTTNSATLVNKGLEVIEAHLLFDVPYERIDVVVHPQSIVHSMVEFLDGSTIAQASPPDMRLPISLGLDWPHRISGVGVPLDWTTATQWTFEPLDEKAFGSVALAKRVGRAGGTYPAVFNAANEQAVDAFHEGRLSFLGIVEVIERVVERHEAPASLTRESLAEAESWARRTADAVIAAL*