name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_245_1
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
795..1127
|
putative transcriptional regulator id=12492951 bin=THIO_HI species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1383..1739)
|
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG id=12492952 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1763..2509)
|
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=12492953 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2595..3377)
|
phosphate transport system permease 1; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] id=12492954 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
phosphate transport system permease 1; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3396..4241)
|
phosphate transport system permease 2; K02038 phosphate transport system permease protein id=12492955 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
phosphate transport system permease 2; K02038 phosphate transport system permease protein
Phosphate transport system permease protein 2 {ECO:0000313|EMBL:AAZ97091.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_500_bf_scaffold_245_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4247..5224)
|
phosphate transporter permease subunit PstC n=1 Tax=Thiobacillus thioparus RepID=UPI0003751CA7
phosphate ABC transporter permease PstC; K02037 phosphate transport system permease protein
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5345..6361)
|
periplasmic phosphate binding protein; K02040 phosphate transport system substrate-binding protein id=12492958 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
periplasmic phosphate binding protein; K02040 phosphate transport system substrate-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6454..7818)
|
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] id=12492959 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_9
unknown
|
Not on your lists |
comp(7808..7951)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_245_10
unknown
|
Not on your lists |
comp(7951..8064)
|
id=12492960 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
|
|
SCNpilot_expt_500_bf_scaffold_245_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8189..10081)
|
membrane protease FtsH catalytic subunit (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] id=12492961 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
membrane protease FtsH catalytic subunit (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-]
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10119..10805)
|
cell division protein FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] id=12492962 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
cell division protein FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10845..11141
|
hypothetical protein; K07574 RNA-binding protein id=12492963 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K07574 RNA-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11158..11616)
|
hypothetical protein id=12492964 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11619..12095)
|
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA id=12492965 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_500_bf_scaffold_245_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12113..15319)
|
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=12492966 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
rbh
|
|
SCNpilot_expt_500_bf_scaffold_245_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15323..16462)
|
carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=12492967 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_18
Parcubacteria (Azambacteria) bacterium GW2011_GWE1_42_9, Parcubacteria, Bacteria
|
Not on your lists |
comp(16617..16871)
|
glutaredoxin 3 id=12492968 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Glutaredoxin 3 {ECO:0000313|EMBL:KKS79162.1}; TaxID=1618624 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWE1_42_9.;"
glutaredoxin 3
|
|
SCNpilot_expt_500_bf_scaffold_245_19
Parcubacteria (Azambacteria) bacterium GW2011_GWE1_42_9, Parcubacteria, Bacteria
|
Not on your lists |
comp(16893..17696)
|
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] id=12492969 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
Dihydrodipicolinate reductase {ECO:0000313|EMBL:KKS79161.1}; TaxID=1618624 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWE1_42_9.;"
|
|
SCNpilot_expt_500_bf_scaffold_245_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18926..19375
|
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator id=12492971 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19465..20061)
|
alpha-ribazole-5`-phosphate phosphatase CobC; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] id=12492972 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
alpha-ribazole-5`-phosphate phosphatase CobC; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20058..21179)
|
gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] id=12492973 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21179..21685)
|
putative lipoprotein id=12492974 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
putative lipoprotein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21761..22348)
|
NAD(P)H-flavin oxidoreductase id=12492975 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
NAD(P)H-flavin oxidoreductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22361..23410
|
cation efflux protein id=12492976 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
cation efflux protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_26
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23505..24707
|
chromate transporter; K07240 chromate transporter id=12492977 bin=THIO_HI species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
Chromate transporter {ECO:0000313|EMBL:KHK61772.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksbergensis.;"
chromate transporter; K07240 chromate transporter
rbh
|
|
SCNpilot_expt_500_bf_scaffold_245_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24915..25517)
|
OmpW family protein; K07275 outer membrane protein id=12492978 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
OmpW family protein; K07275 outer membrane protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25793..26212)
|
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD id=12492979 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26216..26944)
|
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB id=12492980 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_500_bf_scaffold_245_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26946..27626)
|
TonB protein; K03832 periplasmic protein TonB id=12492981 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rbh
TonB protein; K03832 periplasmic protein TonB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|