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SCNpilot_expt_500_bf_scaffold_3756

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3756_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(121..654)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WRF7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42363.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3756_2
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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768..1115
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z630_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO89992.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3756_3
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1112..2029)
DNA (918bp) protein (306aa)
Chromosome replication initiation inhibitor protein n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U9D3_9BURK rbh
Chromosome replication initiation inhibitor protein {ECO:0000313|EMBL:ERT55935.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
chromosome replication initiation inhibitor protein; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor
SCNpilot_expt_500_bf_scaffold_3756_4
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2140..2757
DNA (618bp) protein (206aa)
Amino acid transporter n=2 Tax=Alcaligenes RepID=U7UAR4_9BURK rbh
Amino acid transporter {ECO:0000313|EMBL:ERT55934.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
membrane transport protein
SCNpilot_expt_500_bf_scaffold_3756_5
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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2794..3489
DNA (696bp) protein (232aa)
B3/4 domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J138_PSEUL rbh
B3/4 domain containing protein rbh
B3/4 domain protein {ECO:0000313|EMBL:BAK78529.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
SCNpilot_expt_500_bf_scaffold_3756_6
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3601..3840
DNA (240bp) protein (80aa)
Quarternary ammonium compound transport protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z7C2_9RHOO
Quarternary ammonium compound transport protein {ECO:0000313|EMBL:ENO90253.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE
SCNpilot_expt_500_bf_scaffold_3756_7
Photorhabdus temperata, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3964..4506
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Photorhabdus temperata J3 RepID=U7R7K9_PHOTE
Uncharacterized protein {ECO:0000313|EMBL:ERT14831.1}; TaxID=1389415 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus temperata J3.;"
DinB family protein
SCNpilot_expt_500_bf_scaffold_3756_8
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4526..5515
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D631E rbh
Quinone oxidoreductase {ECO:0000313|EMBL:KKB81651.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
alcohol dehydrogenase zinc-binding domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_3756_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5719..5928)
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8EI44_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EPD37374.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3756_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5991..6689)
DNA (699bp) protein (233aa)
ParB family chromosome partitioning protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WGS3_DELAC
ParB family chromosome partitioning protein {ECO:0000313|EMBL:EPD37375.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
parB; ParB family protein
SCNpilot_expt_500_bf_scaffold_3756_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6686..7270)
DNA (585bp) protein (195aa)
ParB family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W971_ACISJ
ParB family protein; K03497 chromosome partitioning protein, ParB family
ParB family protein {ECO:0000313|EMBL:ABM42796.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Displaying 11 items

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