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SCNpilot_expt_500_bf_scaffold_1885_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 3..263

Top 3 Functional Annotations

Value Algorithm Source
pyruvate dehydrogenase E1 subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] id=12494006 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 87.0
  • Bit_score: 170
  • Evalue 6.20e-40
pyruvate dehydrogenase E1 subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 86.0
  • Bit_score: 165
  • Evalue 6.20e-39
Pyruvate dehydrogenase E1 beta subunit {ECO:0000313|EMBL:AAZ96607.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 86.0
  • Bit_score: 165
  • Evalue 2.80e-38

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
CTGGATCGCGCCGGCATCAAGGCATCGGTCAGCAAGACCCACCGCGCCGTCATCGCCGAAGAAGACGAAGCGCCGGTCGGCGTCGGCGCCGAAGTCATCGCCCTCATCAACGAGGAATGCTTCTTCGAACTCGACGCCGCCCCGGTGCGCGTACATTCCGCGCTGGTGCCGCAGCCCTACAACCATACGCTGGAAAAGGCGGCGATCCCGGATCACGAGGATGTGGTGAAGGCGGTGTTGAAGATGTTCGGAAAGGCTTGA
PROTEIN sequence
Length: 87
LDRAGIKASVSKTHRAVIAEEDEAPVGVGAEVIALINEECFFELDAAPVRVHSALVPQPYNHTLEKAAIPDHEDVVKAVLKMFGKA*