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SCNpilot_expt_500_bf_scaffold_1915

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1915_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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75..968
DNA (894bp) protein (298aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Cytochrome c oxidase subunit 2 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ88_9GAMM rbh
cytochrome c oxidase, subunit II rbh
SCNpilot_expt_500_bf_scaffold_1915_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1031..2647
DNA (1617bp) protein (539aa)
Cytochrome c oxidase subunit I n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ87_9GAMM rbh
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:EIL89378.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c oxidase, subunit I rbh
SCNpilot_expt_500_bf_scaffold_1915_3
unknown

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2668..2799
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1915_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2910..3797
DNA (888bp) protein (296aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 3 n=1 Tax=Rhodanobacter denitrificans RepID=M4NAF9_9GAMM rbh
heme/copper-type cytochrome/quinol oxidase, subunit 3 rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_1915_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4099..5121
DNA (1023bp) protein (341aa)
Undecaprenyl-phosphate galactosephosphotransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVW0_9GAMM
Undecaprenyl-phosphate galactosephosphotransferase {ECO:0000313|EMBL:EIL91351.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
SCNpilot_expt_500_bf_scaffold_1915_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5118..5462
DNA (345bp) protein (115aa)
Undecaprenyl-phosphate galactosephosphotransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVW0_9GAMM
Undecaprenyl-phosphate galactosephosphotransferase {ECO:0000313|EMBL:EIL91351.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
SCNpilot_expt_500_bf_scaffold_1915_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5684..8380
DNA (2697bp) protein (899aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA660
Uncharacterized protein {ECO:0000313|EMBL:EIL91350.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_expt_500_bf_scaffold_1915_8
unknown

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8326..8592
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034AA660
SCNpilot_expt_500_bf_scaffold_1915_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8686..9378)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVV0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91341.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_expt_500_bf_scaffold_1915_10
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9500..10339
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKR1_THIA3
Uncharacterized protein {ECO:0000313|EMBL:KGM52630.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1915_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10423..11292
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B3A1F4
Uncharacterized protein {ECO:0000313|EMBL:AHX16314.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
transcription factor jumonji, jmjC
SCNpilot_expt_500_bf_scaffold_1915_12
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11456..12073
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000318BF1D
Uncharacterized protein {ECO:0000313|EMBL:AIF48394.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_expt_500_bf_scaffold_1915_13
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12315..19577
DNA (7263bp) protein (2421aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003728266
Thioester reductase {ECO:0000313|EMBL:AHX13665.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
amino acid adenylation protein rbh
SCNpilot_expt_500_bf_scaffold_1915_14
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19583..21586
DNA (2004bp) protein (668aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX05_CORCM
tycC5; long-chain-fatty-acid--CoA ligase
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_expt_500_bf_scaffold_1915_15
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21602..22414
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000367CAE6
syrE; non-ribosomal peptide synthetase
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:EET02882.1}; TaxID=320371 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei 1710a.;"
SCNpilot_expt_500_bf_scaffold_1915_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23147..25954
DNA (2808bp) protein (936aa)
Amino acid adenylation protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU5_9GAMM
Amino acid adenylation protein {ECO:0000313|EMBL:EIL91336.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
amino acid adenylation enzyme/thioester reductase family protein
SCNpilot_expt_500_bf_scaffold_1915_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26171..27358
DNA (1188bp) protein (396aa)
O-antigen polymerase family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU2_9GAMM rbh
O-antigen polymerase family protein {ECO:0000313|EMBL:EIL91333.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
O-antigen polymerase family protein
SCNpilot_expt_500_bf_scaffold_1915_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27355..28881
DNA (1527bp) protein (509aa)
Putative polysaccharide biosynthesis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU1_9GAMM
Putative polysaccharide biosynthesis protein {ECO:0000313|EMBL:EIL91332.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
membrane protein involved in the export of O-antigen and teichoic acid
SCNpilot_expt_500_bf_scaffold_1915_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28878..30248
DNA (1371bp) protein (457aa)
Polysaccharide biosynthesis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU0_9GAMM rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EIL91331.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
capsular polysaccharide biosynthesis protein CapK rbh
SCNpilot_expt_500_bf_scaffold_1915_20
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30245..31366
DNA (1122bp) protein (374aa)
glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT9_9GAMM
Glycosyltransferase {ECO:0000313|EMBL:EIL91330.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_expt_500_bf_scaffold_1915_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31363..32511
DNA (1149bp) protein (383aa)
Group 1 family glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT8_9GAMM rbh
Group 1 family glycosyl transferase {ECO:0000313|EMBL:EIL91329.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
group 1 family glycosyl transferase
SCNpilot_expt_500_bf_scaffold_1915_22
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32529..33347)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E29EB5 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX16315.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
oxidoreductase domain-containing protein
SCNpilot_expt_500_bf_scaffold_1915_23
unknown

Not on your lists

33642..33959
DNA (318bp) protein (106aa)

This feature has no annotations

Displaying 23 items

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