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SCNpilot_expt_500_bf_scaffold_6266

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6266_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..803)
DNA (801bp) protein (267aa)
DNA/RNA helicase, superfamily I (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK09_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_6266_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1365..2660
DNA (1296bp) protein (432aa)
Flavin-dependent dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NT02_9GAMM rbh
flavin-dependent dehydrogenase rbh
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:AGG90621.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6266_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2715..3347
DNA (633bp) protein (211aa)
thymidine kinase (EC:2.7.1.21) rbh
Thymidine kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM6_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_6266_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3371..4135
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8R6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95857.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_6266_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4266..4802)
DNA (537bp) protein (179aa)
Nitroreductase-like oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM8_9GAMM rbh
Nitroreductase-like oxidoreductase {ECO:0000313|EMBL:EIL97219.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
nitroreductase-like oxidoreductase; K07078
SCNpilot_expt_500_bf_scaffold_6266_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5032..5859)
DNA (828bp) protein (276aa)
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18) rbh
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM4_9GAMM rbh
SCNpilot_expt_500_bf_scaffold_6266_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5873..6373)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKK6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90617.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6266_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6374..7729)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89640.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type uncharacterized transporter rbh
SCNpilot_expt_500_bf_scaffold_6266_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7729..8484)
DNA (756bp) protein (252aa)
ABC transporter permease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRD0_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:EIL89771.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6266_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8481..9239)
DNA (759bp) protein (253aa)
ABC transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM8_9GAMM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGG90614.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6266_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9427..9576
DNA (150bp) protein (50aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ6_9GAMM
Fatty-acid desaturase {ECO:0000313|EMBL:EIL89637.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
fatty-acid desaturase
Displaying 11 items

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