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SCNpilot_expt_500_bf_scaffold_6508

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6508_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..408
DNA (408bp) protein (136aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X2_9GAMM
isopropylmalate/homocitrate/citramalate synthase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_6508_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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470..1789
DNA (1320bp) protein (440aa)
Amidohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X1_9GAMM rbh
Amidohydrolase {ECO:0000313|EMBL:EIL94862.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amidohydrolase, imidazolonepropionase rbh
SCNpilot_expt_500_bf_scaffold_6508_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1786..2274
DNA (489bp) protein (163aa)
Acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5X0_9GAMM rbh
Acetyltransferase {ECO:0000313|EMBL:EIL94861.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase, N-acetylglutamate synthase
SCNpilot_expt_500_bf_scaffold_6508_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2279..2860
DNA (582bp) protein (194aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5W8_9GAMM rbh
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL94859.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sortase-like acyltransferase rbh
SCNpilot_expt_500_bf_scaffold_6508_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2962..3396)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WML1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00703.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative integral membrane protein
SCNpilot_expt_500_bf_scaffold_6508_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3604..4371
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5W6_9GAMM rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL94857.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein rbh
SCNpilot_expt_500_bf_scaffold_6508_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4499..5014
DNA (516bp) protein (172aa)
Elongation factor P n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5W3_9GAMM
Elongation factor P {ECO:0000313|EMBL:EIL94854.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
translation elongation factor P/translation initiation factor 5A
SCNpilot_expt_500_bf_scaffold_6508_8
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5021..6433)
DNA (1413bp) protein (471aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CBA0_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EGD17185.1}; Flags: Fragment;; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
SCNpilot_expt_500_bf_scaffold_6508_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6830..7135
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMK8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00700.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6508_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7250..8284
DNA (1035bp) protein (345aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTP3_9GAMM rbh
putative TIM-barrel fold metal-dependent hydrolase rbh
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:AGG88372.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6508_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8281..8796
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKS7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88371.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6508_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8892..10169
DNA (1278bp) protein (426aa)
Kynureninase (EC:3.7.1.3) rbh
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Kynureninase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCG2_9GAMM rbh
Displaying 12 items

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