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SCNpilot_expt_500_bf_scaffold_6530

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6530_1
unknown

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comp(86..733)
DNA (648bp) protein (216aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6530_2
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2136..2789)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00037BB913
Uncharacterized protein {ECO:0000313|EMBL:EWS52440.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
SCNpilot_expt_500_bf_scaffold_6530_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3153..3326)
DNA (174bp) protein (58aa)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_6530_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3384..4475
DNA (1092bp) protein (364aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4W3D5_9GAMM rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL93976.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_6530_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4591..5826
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W319_9GAMM rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_6530_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6465..7034
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W320_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93861.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6530_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7096..9591
DNA (2496bp) protein (832aa)
TonB dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W321_9GAMM rbh
TonB dependent receptor {ECO:0000313|EMBL:EIL93862.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor, plug
SCNpilot_expt_500_bf_scaffold_6530_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9651..11135
DNA (1485bp) protein (495aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDC6_9GAMM rbh
NAD-dependent aldehyde dehydrogenase rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6530_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11076..12542)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHS7_9GAMM
long-chain fatty acid transport protein
Long-chain fatty acid transport protein {ECO:0000313|EMBL:AGG87447.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6530_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12736..13029
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHD5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98876.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6530_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13101..16001
DNA (2901bp) protein (967aa)
Ankyrin repeat-containing protein n=3 Tax=Rhodanobacter denitrificans RepID=M4NAE4_9GAMM
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:AGG87445.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6530_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15949..16437
DNA (489bp) protein (163aa)
Ankyrin repeat-containing protein (Fragment) n=1 Tax=Rhodanobacter denitrificans RepID=I4WSE9_9GAMM
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:AGG87445.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6530_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16451..18277)
DNA (1827bp) protein (609aa)
Kef-type potassium/proton antiporter, CPA2 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NAF4_9GAMM rbh
Kef-type potassium/proton antiporter, CPA2 family rbh
Kef-type potassium/proton antiporter, CPA2 family {ECO:0000313|EMBL:AGG87444.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6530_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18435..19493)
DNA (1059bp) protein (353aa)
ATP-binding region, ATPase-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ41_9GAMM rbh
ATP-binding region, ATPase-like protein {ECO:0000313|EMBL:EIL89332.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
histidine kinase rbh
SCNpilot_expt_500_bf_scaffold_6530_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19602..20519)
DNA (918bp) protein (306aa)
Peptidyl-dipeptidase Dcp n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W326_9GAMM
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:EIL93867.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-dependent oligopeptidase
Displaying 15 items

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