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SCNpilot_expt_500_bf_scaffold_6951

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6951_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..443
DNA (441bp) protein (147aa)
Putative Beta-(1-3)-glucosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WM03_9GAMM
exo-beta-1,3-glucanase
Exo-beta-1,3-glucanase {ECO:0000313|EMBL:AGG90254.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6951_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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563..2212
DNA (1650bp) protein (550aa)
Surface antigen (D15) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4N9_9GAMM
Surface antigen (D15) {ECO:0000313|EMBL:EIL94430.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane protein
SCNpilot_expt_500_bf_scaffold_6951_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2493..6242
DNA (3750bp) protein (1250aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJH6_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90257.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_6951_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6440..6568
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJJ9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL99640.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_bf_scaffold_6951_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6590..7744
DNA (1155bp) protein (385aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJK0_9GAMM
SCNpilot_expt_500_bf_scaffold_6951_6
unknown

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comp(7560..8618)
DNA (1059bp) protein (353aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6951_7
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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9171..9641
DNA (471bp) protein (157aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZSF9_9RHOO
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:ENO97263.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
response regulator receiver modulated diguanylate cyclase
SCNpilot_expt_500_bf_scaffold_6951_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9652..10392)
DNA (741bp) protein (247aa)
Dienelactone hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WEV3_9GAMM rbh
dienelactone hydrolase-like enzyme rbh
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:AGG90315.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 8 items

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