ggKbase home page

SCNpilot_expt_500_bf_scaffold_17607

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_17607_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..670)
DNA (669bp) protein (223aa)
ATP-dependent chaperone ClpB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL7_9GAMM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP-dependent chaperone ClpB
SCNpilot_expt_500_bf_scaffold_17607_2
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1105..1803
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A766E
hypothetical protein
Tax=GWC1_Azotobacter_66_9_curated
SCNpilot_expt_500_bf_scaffold_17607_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2205..2996
DNA (792bp) protein (264aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
trehalose-phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
Trehalose-phosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL6_9GAMM
SCNpilot_expt_500_bf_scaffold_17607_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2956..4593
DNA (1638bp) protein (546aa)
Glycosyl hydrolase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL5_9GAMM rbh
Glycosyl hydrolase family protein {ECO:0000313|EMBL:EIL92306.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycosyl hydrolase family protein
SCNpilot_expt_500_bf_scaffold_17607_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5493..6002
DNA (510bp) protein (170aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
otsA; alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Trehalose-6-phosphate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL4_9GAMM
SCNpilot_expt_500_bf_scaffold_17607_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6777..7676)
DNA (900bp) protein (300aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBA3_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_17607_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7741..8649
DNA (909bp) protein (303aa)
Outer membrane protein assembly factor BamD n=1 Tax=Rhodanobacter denitrificans RepID=I4WZI6_9GAMM
Beta-barrel assembly machine subunit BamD rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_17607_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8736..10118)
DNA (1383bp) protein (461aa)
NAD synthetase {ECO:0000313|EMBL:EIL96533.1}; EC=6.3.5.1 {ECO:0000313|EMBL:EIL96533.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAP2_9GAMM
NAD+ synthetase
SCNpilot_expt_500_bf_scaffold_17607_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10508..11320)
DNA (813bp) protein (271aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
succinyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK9_9GAMM rbh
SCNpilot_expt_500_bf_scaffold_17607_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11335..12498)
DNA (1164bp) protein (388aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5) rbh
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYK8_9GAMM rbh
SCNpilot_expt_500_bf_scaffold_17607_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12749..13435
DNA (687bp) protein (229aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Two-component system sensor protein pils n=1 Tax=Rhodanobacter denitrificans RepID=I4WZJ0_9GAMM
signal transduction histidine kinase
Displaying 11 items

View Taxonomy