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SCNpilot_expt_500_bf_scaffold_14124

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_14124_1
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..390
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003453F34
LysR family transcriptional regulator {ECO:0000313|EMBL:KKB07141.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA
SCNpilot_expt_500_bf_scaffold_14124_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(481..1248)
DNA (768bp) protein (256aa)
MltA-interacting protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQE9_9GAMM rbh
MltA-interacting protein {ECO:0000313|EMBL:EIL89440.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
MltA-interacting protein; K07274 outer membrane protein
SCNpilot_expt_500_bf_scaffold_14124_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1483..2208
DNA (726bp) protein (242aa)
Dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF53_9GAMM
Dehydrogenase {ECO:0000313|EMBL:EIL98094.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dehydrogenase
SCNpilot_expt_500_bf_scaffold_14124_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2325..2993
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF51_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98092.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_14124_5
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3068..3793)
DNA (726bp) protein (242aa)
GTP cyclohydrolase (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] rbh
GTP cyclohydrolase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A473E rbh
GTP cyclohydrolase I family protein {ECO:0000313|EMBL:AJZ61459.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
SCNpilot_expt_500_bf_scaffold_14124_6
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3917..4633)
DNA (717bp) protein (239aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
Ferrochelatase n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MR54_PSEPS
hemH; ferrochelatase
SCNpilot_expt_500_bf_scaffold_14124_7
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4953..5591)
DNA (639bp) protein (213aa)
deoxyribodipyrimidine photo-lyase n=1 Tax=Janthinobacterium lividum RepID=UPI000287AC55
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KHA76449.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
deoxyribodipyrimidine photolyase-related protein; K06876 deoxyribodipyrimidine photolyase-related protein
Displaying 7 items

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