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SCNpilot_expt_500_bf_scaffold_4016

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4016_1
unknown

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2..652
DNA (651bp) protein (217aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4016_2
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1261..1812
DNA (552bp) protein (184aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J4_9GAMM
diguanylate cyclase (GGDEF) domain-containing protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_expt_500_bf_scaffold_4016_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1822..2721)
DNA (900bp) protein (300aa)
Disulfide bond chaperone n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG89_9GAMM
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
disulfide bond chaperone
SCNpilot_expt_500_bf_scaffold_4016_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2868..3533
DNA (666bp) protein (222aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodanobacter denitrificans RepID=U3GKL7_9GAMM
monofunctional biosynthetic peptidoglycan transglycosylase
SCNpilot_expt_500_bf_scaffold_4016_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3853..4005
DNA (153bp) protein (51aa)
Signal transduction protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG87_9GAMM
putative signal-transduction protein containing cAMP-binding and CBS domains
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_4016_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4034..5344)
DNA (1311bp) protein (437aa)
ATP/ADP translocase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1J0_9GAMM rbh
ATP/ADP translocase {ECO:0000313|EMBL:EIL93331.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP/ADP translocase rbh
SCNpilot_expt_500_bf_scaffold_4016_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5455..6951
DNA (1497bp) protein (499aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAZ7_9GAMM rbh
choline dehydrogenase-like flavoprotein rbh
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:AGG87770.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_4016_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7061..8938)
DNA (1878bp) protein (626aa)
Peptidase M48 Ste24p n=1 Tax=Rhodanobacter denitrificans RepID=I4WSV4_9GAMM rbh
Zn-dependent protease with chaperone function {ECO:0000313|EMBL:AGG87769.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Zn-dependent protease with chaperone function rbh
SCNpilot_expt_500_bf_scaffold_4016_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8989..9576)
DNA (588bp) protein (196aa)
LemA family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VU05_9GAMM rbh
LemA family protein {ECO:0000313|EMBL:EIL90696.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_4016_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9632..10912
DNA (1281bp) protein (427aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1I6_9GAMM rbh
Beta-lactamase {ECO:0000313|EMBL:EIL93327.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
penicillin-binding protein, beta-lactamase class C rbh
SCNpilot_expt_500_bf_scaffold_4016_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11189..11818)
DNA (630bp) protein (210aa)
TonB protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1I5_9GAMM
TonB protein {ECO:0000313|EMBL:EIL93326.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB family protein
Displaying 11 items

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