ggKbase home page

SCNpilot_expt_500_bf_scaffold_4990

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4990_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..728
DNA (726bp) protein (242aa)
DNA/RNA helicase, superfamily I (EC:3.6.1.-)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA/RNA helicase, superfamily I n=1 Tax=Rhodanobacter denitrificans RepID=M4NKL1_9GAMM
SCNpilot_expt_500_bf_scaffold_4990_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

857..2449
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F20F4A
Sulfotransferase {ECO:0000313|EMBL:AIF46166.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative sulfotransferase
SCNpilot_expt_500_bf_scaffold_4990_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2526..5363)
DNA (2838bp) protein (946aa)
TonB-dependent outer membrane receptor protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8R2_9GAMM rbh
TonB-dependent outer membrane receptor protein {ECO:0000313|EMBL:EIL95853.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB-dependent outer membrane receptor protein rbh
SCNpilot_expt_500_bf_scaffold_4990_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5604..5705)
DNA (102bp) protein (34aa)
Putative permease {ECO:0000313|EMBL:AGG90623.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_4990_5
unknown

Not on your lists

5942..6541
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4990_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6732..7553
DNA (822bp) protein (274aa)
Putative acid phosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM2_9GAMM
Putative acid phosphatase {ECO:0000313|EMBL:EIL97213.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative secreted acid phosphatase
SCNpilot_expt_500_bf_scaffold_4990_7
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7457..9313)
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0003782478
Uncharacterized protein {ECO:0000313|EMBL:KFB72110.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
SCNpilot_expt_500_bf_scaffold_4990_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9633..10463
DNA (831bp) protein (277aa)
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00393}; Short=GPAT {ECO:0000256|HAMAP-Rule:MF_00393};; EC=2.3.1.15 {ECO:0000256|HAMAP-Rule:MF_00393};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycerol-3-phosphate acyltransferase (EC:2.3.1.15)
Glycerol-3-phosphate acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM0_9GAMM
SCNpilot_expt_500_bf_scaffold_4990_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10495..11460
DNA (966bp) protein (322aa)
Amidohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCL9_9GAMM
Amidohydrolase {ECO:0000313|EMBL:EIL97210.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
amidohydrolase, imidazolonepropionase
Displaying 9 items

View Taxonomy