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SCNpilot_expt_500_bf_scaffold_12142

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12142_1
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(175..864)
DNA (690bp) protein (230aa)
Methyltransferase type 11 n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M1B7_METRJ
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACB26092.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_expt_500_bf_scaffold_12142_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(999..2066)
DNA (1068bp) protein (356aa)
malic enzyme (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
malic enzyme n=1 Tax=Dyella ginsengisoli RepID=UPI00034CEEFC
Malic enzyme {ECO:0000313|EMBL:GAN45454.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
SCNpilot_expt_500_bf_scaffold_12142_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3241..4512)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLM1_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90548.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_12142_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4582..5637)
DNA (1056bp) protein (352aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1R3_9GAMM rbh
ribosome small subunit-dependent GTPase A rbh
SCNpilot_expt_500_bf_scaffold_12142_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6053..7021
DNA (969bp) protein (323aa)
Aminotransferase AlaT {ECO:0000313|EMBL:EIL97706.1}; EC=2.6.1.2 {ECO:0000313|EMBL:EIL97706.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Aminotransferase AlaT n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE15_9GAMM
aspartate/tyrosine/aromatic aminotransferase
SCNpilot_expt_500_bf_scaffold_12142_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7290..7613
DNA (324bp) protein (108aa)
Lysophospholipase L1-like esterase n=1 Tax=Rhodanobacter denitrificans RepID=M4NSS9_9GAMM
lysophospholipase L1-like esterase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_12142_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7676..7840
DNA (165bp) protein (55aa)
Glutaredoxin-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR52_9GAMM
Glutaredoxin-like protein {ECO:0000313|EMBL:EIL89693.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
monothiol glutaredoxin, Grx4 family
Displaying 7 items

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