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SCNpilot_expt_500_bf_scaffold_20891

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_20891_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..113)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTB5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02707.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_20891_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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235..1188
DNA (954bp) protein (318aa)
Membrane-bound metallopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX84_9GAMM
membrane-bound metallopeptidase
Membrane-bound metallopeptidase {ECO:0000313|EMBL:AGG90590.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_20891_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1185..1361
DNA (177bp) protein (59aa)
Membrane-bound metallopeptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ15_9GAMM
Membrane-bound metallopeptidase {ECO:0000313|EMBL:EIL89306.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
membrane-bound metallopeptidase
SCNpilot_expt_500_bf_scaffold_20891_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1505..2821
DNA (1317bp) protein (439aa)
C-terminal processing peptidase n=2 Tax=Rhodanobacter denitrificans RepID=M4NSX2_9GAMM
C-terminal processing peptidase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_20891_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2818..4044
DNA (1227bp) protein (409aa)
ndh; NADH dehydrogenase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3]
NADH dehydrogenase (Ubiquinone) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ23_9GAMM
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:EIL89314.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_expt_500_bf_scaffold_20891_6
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4174..4977)
DNA (804bp) protein (268aa)
RNA polymerase sigma factor id=2803994 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor
Tax=GWF1_Xanthomonadales_69_6_curated
Displaying 6 items

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