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SCNpilot_expt_500_bf_scaffold_2632

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2632_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..191
DNA (189bp) protein (63aa)
Uncharacterized protein involved in copper resistance n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR0_9GAMM
uncharacterized protein involved in copper resistance
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:AGG88843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_2632_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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203..1303
DNA (1101bp) protein (367aa)
Cytochrome c family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY8_9GAMM
Cytochrome c family protein {ECO:0000313|EMBL:EIM01180.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ketosteroid isomerase-like enzyme
SCNpilot_expt_500_bf_scaffold_2632_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1306..1758
DNA (453bp) protein (151aa)
Putative metal-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDK8_9GAMM
putative metal-binding protein
Putative metal-binding protein {ECO:0000313|EMBL:AGG88845.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_2632_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1853..2473
DNA (621bp) protein (207aa)
Putative multicopper oxidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM98_9GAMM
putative multicopper oxidase
Putative multicopper oxidase {ECO:0000313|EMBL:AGG88846.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_2632_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2442..3854
DNA (1413bp) protein (471aa)
Putative multicopper oxidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM98_9GAMM rbh
putative multicopper oxidase rbh
Putative multicopper oxidase {ECO:0000313|EMBL:AGG88846.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_2632_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4472..5758
DNA (1287bp) protein (429aa)
Putative outer membrane efflux protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ1_9GAMM
Putative outer membrane efflux protein {ECO:0000313|EMBL:EIM01183.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane protein
SCNpilot_expt_500_bf_scaffold_2632_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5755..7053
DNA (1299bp) protein (433aa)
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ9_9GAMM
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family {ECO:0000313|EMBL:EIL90340.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RND family efflux transporter, MFP subunit
SCNpilot_expt_500_bf_scaffold_2632_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7050..10226
DNA (3177bp) protein (1059aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Rhodanobacter denitrificans RepID=M4NMA6_9GAMM
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG88851.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
heavy metal efflux pump, cobalt-zinc-cadmium
SCNpilot_expt_500_bf_scaffold_2632_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10230..10580
DNA (351bp) protein (117aa)
Copper binding periplasmic protein CusF n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88852.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_2632_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10620..10841)
DNA (222bp) protein (74aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL7_9GAMM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGG88855.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_2632_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11016..11372
DNA (357bp) protein (119aa)
Mercuric transport protein MerT n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL6_9GAMM
MerT mercuric transport protein
MerT mercuric transport protein {ECO:0000313|EMBL:AGG88856.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_2632_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11465..11644
DNA (180bp) protein (60aa)
Copper chaperone n=1 Tax=Rhodanobacter denitrificans RepID=M4NFM6_9GAMM
copper chaperone
Copper chaperone {ECO:0000313|EMBL:AGG88857.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_2632_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11856..12476)
DNA (621bp) protein (207aa)
RND OM export protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ9_9GAMM
RND OM export protein {ECO:0000313|EMBL:EIM01191.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Co/Zn/Cd efflux system component
SCNpilot_expt_500_bf_scaffold_2632_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12489..13946)
DNA (1458bp) protein (486aa)
Iron permease FTR1 n=1 Tax=Rhodanobacter denitrificans RepID=I4WWK0_9GAMM
Iron permease FTR1 {ECO:0000313|EMBL:EIM01192.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
high-affinity Fe2+/Pb2+ permease
Displaying 14 items

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