ggKbase home page

SCNpilot_expt_500_bf_scaffold_7412

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7412_1
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1201)
DNA (1200bp) protein (400aa)
Large Ala/Gln-rich protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z9V6_9XANT
Large Ala/Gln-rich protein {ECO:0000313|EMBL:ETC86066.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7412_2
Beauveria bassiana, Beauveria, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(1198..1635)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003764651
Uncharacterized protein {ECO:0000313|EMBL:KGQ02449.1}; TaxID=1245745 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae; Beauveria.;" source="Beauveria bassiana D1-5.;"
SCNpilot_expt_500_bf_scaffold_7412_3
unknown

Not on your lists

comp(1802..2185)
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7412_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2301..3629)
DNA (1329bp) protein (443aa)
Threonine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIH9_9GAMM rbh
threonine synthase rbh
Threonine synthase {ECO:0000313|EMBL:AGG90709.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_7412_5
unknown

Not on your lists

comp(3622..3801)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7412_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3798..4154)
DNA (357bp) protein (119aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY4_9GAMM
SCNpilot_expt_500_bf_scaffold_7412_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4168..4593)
DNA (426bp) protein (142aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY4_9GAMM
SCNpilot_expt_500_bf_scaffold_7412_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4666..5817)
DNA (1152bp) protein (384aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine dehydrogenase (EC:1.1.1.3) rbh
Homoserine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY5_9GAMM rbh
SCNpilot_expt_500_bf_scaffold_7412_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6202..6936
DNA (735bp) protein (245aa)
Cytochrome c n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY6_9GAMM rbh
Cytochrome c {ECO:0000313|EMBL:EIL92077.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c553 rbh
SCNpilot_expt_500_bf_scaffold_7412_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7483..8160
DNA (678bp) protein (226aa)
Cytochrome c, mono-and diheme variants family n=1 Tax=Rhodanobacter denitrificans RepID=M4NIH5_9GAMM
cytochrome c, mono- and diheme variants family
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:AGG90704.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_7412_11
unknown

Not on your lists

8582..8899
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7412_12
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

8902..9861
DNA (960bp) protein (320aa)
Hypothetical membrane protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0KZF2_ZOBGA
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_expt_500_bf_scaffold_7412_13
unknown

Not on your lists

comp(9729..9986)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7412_14
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10089..11552
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037B0E2A
Tyrosinase {ECO:0000313|EMBL:ESZ51045.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
tyrosinase
SCNpilot_expt_500_bf_scaffold_7412_15
unknown

Not on your lists

11549..12025
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7412_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12318..13466
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCD4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97125.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sugar phosphate isomerase/epimerase
SCNpilot_expt_500_bf_scaffold_7412_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13470..13955
DNA (486bp) protein (162aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
LuxS protein involved in autoinducer AI2 synthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NKU1_9GAMM
LuxS protein involved in autoinducer AI2 synthesis
SCNpilot_expt_500_bf_scaffold_7412_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13952..15100
DNA (1149bp) protein (383aa)
3-dehydroquinate synthetase (EC:4.2.3.4) rbh
2-epi-5-epi-valiolone synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCD2_9GAMM rbh
3-dehydroquinate synthase {ECO:0000256|SAAS:SAAS00196478}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_bf_scaffold_7412_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15078..15788
DNA (711bp) protein (237aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64) rbh
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIC9_9GAMM rbh
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_7412_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15793..16275
DNA (483bp) protein (161aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIH1_9GAMM
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:AGG90699.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_7412_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16260..16637
DNA (378bp) protein (126aa)
UbiA prenyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCD0_9GAMM
UbiA prenyltransferase {ECO:0000313|EMBL:EIL97121.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase
SCNpilot_expt_500_bf_scaffold_7412_22
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17326..18063
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CDV6_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EWC39744.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7412_23
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18066..18662
DNA (597bp) protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:KJV24955.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
SCNpilot_expt_500_bf_scaffold_7412_24
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18677..19477
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K902_PSEPS
Uncharacterized protein {ECO:0000313|EMBL:KJM11403.1}; TaxID=61645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7412_25
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19574..20299)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39N69_BURS3
YVTN beta-propeller repeat-containing protein {ECO:0000313|EMBL:KHL07996.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7412_26
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20852..21550)
DNA (699bp) protein (233aa)
creatininase (EC:3.5.2.10)
creatininase n=1 Tax=Bordetella sp. FB-8 RepID=UPI000378722D
Creatininase {ECO:0000313|EMBL:AHX14085.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Displaying 26 items

View Taxonomy