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SCNpilot_expt_500_bf_scaffold_1097_15

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(13279..13842)

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein 1B n=1 Tax=Rhodanobacter denitrificans RepID=I4WR29_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 186.0
  • Bit_score: 341
  • Evalue 7.40e-91
penicillin-binding protein 1B similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 186.0
  • Bit_score: 341
  • Evalue 2.30e-91
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 186.0
  • Bit_score: 341
  • Evalue 1.00e-90

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
TTGCCGCTGCTGGCGGTGCGCGGCGTGCTCGACGGCAGCGGCCGCACGATCAAGCGCTACCAGGTGCAGCCCGGTCCCGGCGAATACCAGGAGGCGGTGCGGCTGACCACCTGGGCAATGCAGCAGGTGGCTGAGTACGGCACCGCCAGCGCGATCGGCAACTCCGCGCTGGCCTCGCTGCACGCCGCCGGCAAGACCGGCACCAGCAACGACATGCGCGACAGCTGGTTCGCCGGCTTCACCGGCGACCACCTGGCAGTGTTCTGGATGGGCCGCGACGACAACAAGCCGACCACGCTGTTCGGCGCCAGCGGCGGCTTGCGCGCCTGGCGCGACCTGTTCGCCAAGCTGCCCACCACGCCGTTGTCCGCCGCACCGGGACCGGGCCTGGAAATGGCCTGGATCAACCCCGCCGATGGCCGCCGCACCGAGCCGCAATGCCAGGGCGCGCAGCAGGTGCCGGTGGTCGCCGGCAGCCTGCCGGCCGATGCCGAGGGCTGCTTCTGGCAAAGCCTGTTCGGCGGCGACACCGCCACCCCCGCTCCCTCGACCACCACGCCGTGA
PROTEIN sequence
Length: 188
LPLLAVRGVLDGSGRTIKRYQVQPGPGEYQEAVRLTTWAMQQVAEYGTASAIGNSALASLHAAGKTGTSNDMRDSWFAGFTGDHLAVFWMGRDDNKPTTLFGASGGLRAWRDLFAKLPTTPLSAAPGPGLEMAWINPADGRRTEPQCQGAQQVPVVAGSLPADAEGCFWQSLFGGDTATPAPSTTTP*