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SCNpilot_expt_500_bf_scaffold_1097_22

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(23346..24980)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Q0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 528.0
  • Bit_score: 916
  • Evalue 9.50e-264
ATP-dependent RNA helicase {ECO:0000313|EMBL:EIL94441.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 528.0
  • Bit_score: 916
  • Evalue 1.30e-263
ATP-dependent helicase HrpA similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 534.0
  • Bit_score: 900
  • Evalue 2.90e-259

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1635
ATGAACGACCACTGCGCGCCCGCATCCGATCCCGCTGCCGATCCAGGCTTGCGCACCTTGCGCCGGCAGCTGGATGCGGTGTGCAGTCGCGACTTCGGTCGCCTGCTGGGACGTTGGCGCACGCTGTCGCGCCGACCCGACGAAAAGAAGATGGGGGCGCTGGCCGCCGATATCGAGCGCTCCGCGGCCAGACGCCGCGACCGTGCCGCGGCCAAGCCCGAAATCCGGCTGGACGAGTCGCTGCCGATCAGCGCGCGCGGCGAGGACATCGTCAAGCTGATCCGCGAACACCAGGTGGTGGTGATCGCCGGCGAGACCGGTTCGGGCAAGACCACCCAGCTGCCGAAGCTGTGCCTGGCCGCCGGCCGCGGCGAAGCGGGCATGATCGGCTGCACCCAGCCGCGTCGGCTGGCCGCGCGCTCGGTGGCGCGCCGCGTGGCGGAGGAGCTGGGCACGCCGCTGGGCGAGGTCGTGGGTTTCCAGGTGCGCTTCAACGACCAGGTGTCCGAGCGCAGCCTGATCAAGTTCATGACCGACGGCATCCTGCTCGCCGAGACCCAGGGCGATCCGTGGCTGAGTGCCTACGACACCATCATCATCGACGAGGCGCACGAGCGCAGCCTCAACATCGACTTCCTGCTCGGCTACCTCAAGCGTCTGGCGCTGAAGCGGCCGGAGCTGAAGATCATCGTCACCTCGGCGACCATCGACACCGCAAGGTTCGCCGAACACTTCGGCGGCGCGCCGGTGGTCGAGGTGGAAGGACGGGCGTACCCGGTGGAGTTGCGCTGGCGGCCGGTGGAAGCCGCAGGCAAGGGCATGCAGCAGGGCAGCGCCGAACACATCGCCGCCGTGCTCGACGAAATCACCCGCGACGATCCGCGCGGCGACGTGCTGGTGTTCCTGCCCGGCGAGCGCGAGATCCGCGACGCGCACCAGCTGCTGTCGCGCCGGCAATACCGCGAGACCGAGATCATGCCGCTGTACGCGCGGCTTTCCGCCGGCGACCAGGACCGCGTGTTCAAGCCCGGCGTGAAGCGCCGCGTGGTGCTGGCCACCAACGTCGCCGAGACCTCGCTCACGGTGCCGCGCATCCGCTACGTGATCGACACCGGCACCGCGCGGGTCAAGCGCTACAGCCAGCGCAGCCAGCTCGAGCGGCTGCATGTCGAACCGATCTCGCAGGCCGCCGCCGACCAGCGCAAGGGCCGCTGCGGCCGCGTCGGACCTGGCGTCTGCTATCGCCTCTACGACGAAGCCGATTTCGCCGGCCGCGCCGCGTTCACCGATCCGGAGCTGCTGCGCTCGTCGCTGGCCAACGTGATCCTGCGCATGCTGGCGCTGAAGCTGGGCGAGGTCGATGAGTTCCCGTTCCTGGAAGCGCCCGACCCGCGCGTGATCGCCGACGGCTTCCGCCGGCTCACCGAGATTTCCGCGATCGACGAGGCGCGCAGGCTCACCGCGATCGGCCGCACGCTGGCGCGGCTGCCGATCGACGTGCAGGCGAGCTGCTGGTCATCGTCGCCTTCCTCAGCATCCAGGACCCGCGCGAGCGGCCCGGCGATGCACGCCAGCAGGCCGATGCCGCGCACGCCGTGTTCGCCGACCCGAAGTCCGACTTCATCGGCGTGCTGA
PROTEIN sequence
Length: 545
MNDHCAPASDPAADPGLRTLRRQLDAVCSRDFGRLLGRWRTLSRRPDEKKMGALAADIERSAARRRDRAAAKPEIRLDESLPISARGEDIVKLIREHQVVVIAGETGSGKTTQLPKLCLAAGRGEAGMIGCTQPRRLAARSVARRVAEELGTPLGEVVGFQVRFNDQVSERSLIKFMTDGILLAETQGDPWLSAYDTIIIDEAHERSLNIDFLLGYLKRLALKRPELKIIVTSATIDTARFAEHFGGAPVVEVEGRAYPVELRWRPVEAAGKGMQQGSAEHIAAVLDEITRDDPRGDVLVFLPGEREIRDAHQLLSRRQYRETEIMPLYARLSAGDQDRVFKPGVKRRVVLATNVAETSLTVPRIRYVIDTGTARVKRYSQRSQLERLHVEPISQAAADQRKGRCGRVGPGVCYRLYDEADFAGRAAFTDPELLRSSLANVILRMLALKLGEVDEFPFLEAPDPRVIADGFRRLTEISAIDEARRLTAIGRTLARLPIDVQASCWSSSPSSASRTRASGPAMHASRPMPRTPCSPTRSPTSSAC*