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SCNpilot_expt_500_bf_scaffold_1097_34

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(42346..43623)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter denitrificans RepID=M4NJH1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 425.0
  • Bit_score: 601
  • Evalue 5.30e-169
multidrug resistance efflux pump similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 425.0
  • Bit_score: 601
  • Evalue 1.70e-169
Multidrug resistance efflux pump {ECO:0000313|EMBL:AGG90252.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 425.0
  • Bit_score: 601
  • Evalue 7.40e-169

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGCCCAAGGTATCATTGTTCAGACAGGAAGTCGTGGACGCTCGACACGGAAGCTGGCTGGGTTCCGTCATTGTCGTCGCGCCCCCATCGCGATGGCTGTTAACCCTGCTGGCTATGGCATTCGCCGTGGCCATGCTCCTGCTATTGTTTTTCGGCCATTACACCCGTCGTGAGACTGTCAGCGGGCAGTTGGTCCCCAGTACAGGGGTGCTCAACATTGCCGCCCCAAGCGCGGGGACTATTACTCGTTTGAACGTGTATGACGGCCAAACTGTCAAGGCAGGAGATGCATTACTCGAACTCTCCAGTGAGCAGAACAGCGTCGCACTCGGCGATACAAATGCGTTGGTTGGCCAGCAGCTGGACAACCAACGAGCACGATTGAAGGGCGATCTAGTCAATCAGCAACTATTGTTGCAGAAGCAAGATGAGGCTTTGAGGACCAAGGCTGCATTGTTGCGTGCGCAACTGGGCCAAATTGCGCGGCAACTCGCGGTCCAGCGACAGCAAGTAGTCGGCAAACAGCAGTTGACAGAACGCATCAAGCCACTTCTTGCTTCGGGTTACGTCTCTGCGATACAGGTTCAGCAGCAACAAGCGGCTGTATTTGACGCTCAAACCCAATACATGGGGCTGGTGCGGCAGCAACTTGACGTTCGTCAACAACTTGATGCAACGCAACAACAATTGGCGCAGTTGCCGTTAGATGCCAAAAGCAAACGTAATGATACCGAGCGTCAGCTCGCTTCTGTCGCCCAATCGATAGCCCAGAATGAGATGCAGCGTGCCTTGGTACTACGTGCCCCAACTGATGGTGTCGTTTCTGCGGTGCTTTTGAAGGAAGGTCAGATGGTCACCCCTGGCAGGCCGTTACTTTCCATCTTACCGACCGGCTCAACTATGCAGGCGCAGCTCTTGGTGCCCAGTCGCGCAATCGGCTTCGTCGAGCAGGGTAGCAAGGTGGTATTGCGATACCAGGCCTTTCCTTATCAAAAATTCGGTCAGCAGTATGGGCGGGTGACAGAAATTTCACTCAGTGCTCTAACACCATCTGAGGTCGGTACGCTTGGCGGACGACAGGTATCTGAACCAATGTATCGCGTGAACGTGGAACTGGAAAAGCAGTATGTAATGGCCTATGGCAAGGCTCAGCCAATAAAGCCAGGCATGGCGCTGGACGCTGATATCATGTTGGACCGTCGTCGCCTAATCGAGTGGGTGCTTGGGCCGGTATATGGAGTCACTCATGACATAGCGGGGGCTGCTGCACATGGCTGA
PROTEIN sequence
Length: 426
MPKVSLFRQEVVDARHGSWLGSVIVVAPPSRWLLTLLAMAFAVAMLLLLFFGHYTRRETVSGQLVPSTGVLNIAAPSAGTITRLNVYDGQTVKAGDALLELSSEQNSVALGDTNALVGQQLDNQRARLKGDLVNQQLLLQKQDEALRTKAALLRAQLGQIARQLAVQRQQVVGKQQLTERIKPLLASGYVSAIQVQQQQAAVFDAQTQYMGLVRQQLDVRQQLDATQQQLAQLPLDAKSKRNDTERQLASVAQSIAQNEMQRALVLRAPTDGVVSAVLLKEGQMVTPGRPLLSILPTGSTMQAQLLVPSRAIGFVEQGSKVVLRYQAFPYQKFGQQYGRVTEISLSALTPSEVGTLGGRQVSEPMYRVNVELEKQYVMAYGKAQPIKPGMALDADIMLDRRRLIEWVLGPVYGVTHDIAGAAAHG*