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SCNpilot_expt_500_bf_scaffold_2018_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(5277..5828)

Top 3 Functional Annotations

Value Algorithm Source
TetR-family transcriptional regulator n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8H9_AROAE similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 185.0
  • Bit_score: 209
  • Evalue 3.30e-51
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 185.0
  • Bit_score: 209
  • Evalue 1.00e-51
TetR-family transcriptional regulator {ECO:0000313|EMBL:CAI06380.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 185.0
  • Bit_score: 209
  • Evalue 4.60e-51

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Taxonomy

Aromatoleum aromaticum → Aromatoleum → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGGCCTCGTTGCGCGCCAATTGTTCGCATCGCACGGCTATGCCCAGGTGACCATGGAGCAGGTCGCCGCCCAGGCCGGCGTATCCAAGCGCACCCTGTACAAATACTTTCCGGCCAAAGAAGCTCTGCTGGAACACACGCTGGAAGCTTCCCTCTCGAAAGACCTCGCAACACGCGACTTCAGCCTGCACGAACGTGCCGGCTTCCGCGCCGGCGCCACGGCACTGCTGCACGAATCGGCGCACTGGTGCGAACAGCACGCCGATATCCTGTTGCCCTACATCCGCTACAAGTTCGCCAATTTCGACCCGGGCGCCAGGCCGAAGGAAGATCGCGGCCTGCTTCCGCTCTGGGTGATGCTGATCGAAGCCGCCCAGGATCGCGGCGAACTGGCGCCGCAGCATCGCTCCGAACAACTGGGCATCTATTTCCACTACCTCTACCTGGGTGCCCTGATGCGCTGGCTCAGCGAGCCGGGCCTCGACCTGCGGCAAGAGTTCGACATGGTGATCGGGCTGTTCATGGACGGGGCGGCGGCCGGCGTGAATTGA
PROTEIN sequence
Length: 184
MGLVARQLFASHGYAQVTMEQVAAQAGVSKRTLYKYFPAKEALLEHTLEASLSKDLATRDFSLHERAGFRAGATALLHESAHWCEQHADILLPYIRYKFANFDPGARPKEDRGLLPLWVMLIEAAQDRGELAPQHRSEQLGIYFHYLYLGALMRWLSEPGLDLRQEFDMVIGLFMDGAAAGVN*