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SCNpilot_expt_500_bf_scaffold_2018

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2018_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

85..765
DNA (681bp) protein (227aa)
GNAT family acetyltransferase n=1 Tax=Patulibacter americanus RepID=UPI0003B4A9F9
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AHG93659.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
N-acetyltransferase GCN5
SCNpilot_expt_500_bf_scaffold_2018_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(573..1070)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK21_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99812.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_expt_500_bf_scaffold_2018_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1251..2693)
DNA (1443bp) protein (481aa)
Phospholipase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK20_9GAMM rbh
Phospholipase {ECO:0000313|EMBL:EIL99811.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2018_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2826..3581
DNA (756bp) protein (252aa)
Lipoprotein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W115_9GAMM
Lipoprotein {ECO:0000313|EMBL:EIL93156.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2018_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3660..5090)
DNA (1431bp) protein (477aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W711_9GAMM rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EIL95252.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NAD-dependent aldehyde dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_2018_6
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5277..5828)
DNA (552bp) protein (184aa)
TetR-family transcriptional regulator n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8H9_AROAE
TetR family transcriptional regulator
TetR-family transcriptional regulator {ECO:0000313|EMBL:CAI06380.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SCNpilot_expt_500_bf_scaffold_2018_7
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5945..7156
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8I0_AROAE rbh
Glycosyl transferase {ECO:0000313|EMBL:KIF81055.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2018_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7693..8148
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Vibrio nigripulchritudo SOn1 RepID=U4JQ71_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KGJ96636.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio psychroerythus).;"
SCNpilot_expt_500_bf_scaffold_2018_9
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8145..9065
DNA (921bp) protein (307aa)
histone deacetylase superfamily protein; K11418 histone deacetylase 11 [EC:3.5.1.98]
Acetoin utilization protein AcuC n=1 Tax=Pseudoalteromonas sp. BSi20495 RepID=G7G3Z1_9GAMM rbh
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
SCNpilot_expt_500_bf_scaffold_2018_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9096..10367)
DNA (1272bp) protein (424aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEY6_9GAMM
SCNpilot_expt_500_bf_scaffold_2018_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10492..11481)
DNA (990bp) protein (330aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NES6_9GAMM
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:AGG89304.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_500_bf_scaffold_2018_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11478..11864)
DNA (387bp) protein (129aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WG15_9GAMM
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_2018_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11881..13875
DNA (1995bp) protein (665aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WK14_9GAMM rbh
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:EIL99805.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
Displaying 13 items

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