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SCNpilot_expt_500_bf_scaffold_1590_20

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(16768..17496)

Top 3 Functional Annotations

Value Algorithm Source
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 242.0
  • Bit_score: 426
  • Evalue 2.40e-116
1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase (EC:5.3.1.16) similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 242.0
  • Bit_score: 412
  • Evalue 1.10e-112
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8G1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 242.0
  • Bit_score: 426
  • Evalue 1.70e-116
  • rbh

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGAACTTCGACGTGATTCCCGCGATCGACTTGCGCGGCGGCCAGGTGGTGCGCCTGAAGCAGGGCGACTACGCGCAGCAGACGACCTACGCGGCGGACCCGCGCGAGCTGGCCGGGCGCTACGCCGACGCCGGTGCGCGCTGGCTGCACCTGGTCGACCTGGATGGCGCACGTTCGGGCCGGCTGGACAATCTCGCGGTGATCGCCGCGATCGCCACCGATGGCATGGCGATTCAGGCCGGTGGCGGCGTGCGCGAAGAGGCAGATCTGCAGCGGTTGTTCGATGCCGGCGTGCAGCGCGTGGTGGTTGGCAGCGTGGCGGTGCGCGATCCGGCGCGTGTCGCCGCCTGGCTGGCGAAGTACGGCGCAGAGCGGCTGACCCTCGCGCTGGACACCCGCCACGCGGAAGGACGCTGGGTCCTGCCCAGCGCCGGCTGGACCGAAGTGGAGGCGCGCACGCTGGACGAGCTGGCACCGTGGTACGCAGCACGCGGCGCCCGTCACCTGTTGTGCACCGACATCGATCGCGACGGCATGCTCGCCGGCTTCAATCTCGACCTGTATCGCCACCTCGTGACCAGCGTGCCGCAACTGGCGCTGCAGGCGTCCGGCGGGGTGCGTTCGCTGGACGATATCCGTGCCGCGCGCGATGCCGGCGCGAATGCGGTGATCCTCGGTCGCGCCCTGCTGGAAGGGAGTTTCACCGTGGCGGAGGCGCTGGCGTGCTGA
PROTEIN sequence
Length: 243
MNFDVIPAIDLRGGQVVRLKQGDYAQQTTYAADPRELAGRYADAGARWLHLVDLDGARSGRLDNLAVIAAIATDGMAIQAGGGVREEADLQRLFDAGVQRVVVGSVAVRDPARVAAWLAKYGAERLTLALDTRHAEGRWVLPSAGWTEVEARTLDELAPWYAARGARHLLCTDIDRDGMLAGFNLDLYRHLVTSVPQLALQASGGVRSLDDIRAARDAGANAVILGRALLEGSFTVAEALAC*