name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_1590_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
349..1992
|
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00036E15EE
rbh
Type II DNA modification methyltransferase {ECO:0000313|EMBL:EIL95007.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_2
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1966..3012)
|
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00035EFDD4
rbh
Restriction endonuclease {ECO:0000313|EMBL:KGJ22092.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
type II restriction endonuclease, putative
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_3
unknown
|
Not on your lists |
comp(3228..3362)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_1590_4
unknown
|
Not on your lists |
comp(3748..4068)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_1590_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4755..5285
|
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA topoisomerase 4 subunit B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6B5_9GAMM
DNA topoisomerase IV, B subunit, proteobacterial
|
|
SCNpilot_expt_500_bf_scaffold_1590_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5428..6021
|
Beta-Ig-H3/fasciclin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6B4_9GAMM
rbh
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:EIL95005.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
beta-Ig-H3/fasciclin
|
|
SCNpilot_expt_500_bf_scaffold_1590_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6131..6652
|
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6)
rbh
3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6B3_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6713..7255)
|
NUDIX hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6B2_9GAMM
rbh
NUDIX hydrolase {ECO:0000313|EMBL:EIL95003.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ADP-ribose pyrophosphatase
|
|
SCNpilot_expt_500_bf_scaffold_1590_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7424..8953
|
Amino acid transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4WQK2_9GAMM
rbh
Amino acid transporter {ECO:0000313|EMBL:EIM01744.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family
|
|
SCNpilot_expt_500_bf_scaffold_1590_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9030..9962
|
Cationic amino acid transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6B0_9GAMM
Cationic amino acid transporter {ECO:0000313|EMBL:EIL95001.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid transporter
|
|
SCNpilot_expt_500_bf_scaffold_1590_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9962..10423
|
Cationic amino acid transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6B0_9GAMM
Cationic amino acid transporter {ECO:0000313|EMBL:EIL95001.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid transporter
|
|
SCNpilot_expt_500_bf_scaffold_1590_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10800..11132)
|
High potential iron-sulfur protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRH2_9GAMM
High potential iron-sulfur protein {ECO:0000313|EMBL:EIM02064.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
High potential iron-sulfur protein
|
|
SCNpilot_expt_500_bf_scaffold_1590_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11257..11907
|
Methylthioribulose-1-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_01677}; Short=MTRu-1-P dehydratase {ECO:0000256|HAMAP-Rule:MF_01677};; EC=4.2.1.109 {ECO:0000256|HAMAP-Rule:MF_01677};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methylthioribulose-1-phosphate dehydratase (EC:4.2.1.109)
rbh
Methylthioribulose-1-phosphate dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRH1_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11904..12455
|
Acireductone dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLI1_9GAMM
rbh
Acireductone dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00009702}; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00090345}; Acireductone dioxygenase (Fe(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; Acireductone dioxygenase (Ni(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
hypothetical protein, contains double-stranded beta-helix domain
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12535..13227
|
Enolase-phosphatase E1 {ECO:0000256|HAMAP-Rule:MF_01681}; EC=3.1.3.77 {ECO:0000256|HAMAP-Rule:MF_01681};; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000256|HAMAP-Rule:MF_01681}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Enolase-phosphatase E1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6A6_9GAMM
rbh
acireductone synthase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13229..14236
|
Peptidase C13 family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH9_9GAMM
Peptidase C13 family protein {ECO:0000313|EMBL:EIM02060.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptidase C13 family
|
|
SCNpilot_expt_500_bf_scaffold_1590_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14386..15234
|
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK10_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87551.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1590_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15257..15889)
|
phosphoribosyl-AMP cyclohydrolase (EC:3.6.1.31 3.5.4.19)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH5_9GAMM
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
|
|
SCNpilot_expt_500_bf_scaffold_1590_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16001..16774)
|
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
imidazole glycerol phosphate synthase subunit hisF (EC:4.1.3.-)
rbh
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRG6_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16768..17496)
|
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8G1_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17493..18083)
|
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-)
rbh
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrifica
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH2_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18083..19150)
|
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
rbh
Imidazole glycerol-phosphate dehydratase/histidinol phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH1_9GAMM
rbh
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_1590_23
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19147..20040)
|
histidinol phosphate aminotransferase apoenzyme (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLH0_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_1590_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20160..21458)
|
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Histidinol dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLB7_9GAMM
rbh
histidinol dehydrogenase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21487..22329)
|
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP phosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W688_9GAMM
ATP phosphoribosyltransferase
|
|
SCNpilot_expt_500_bf_scaffold_1590_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22326..22661)
|
TrpR-related protein YerC/YecD n=1 Tax=Rhodanobacter denitrificans RepID=I4WLG7_9GAMM
TrpR-related protein YerC/YecD
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_1590_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22864..23025)
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRF5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02047.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SSU ribosomal protein S31P
|
|
SCNpilot_expt_500_bf_scaffold_1590_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23076..23507)
|
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK24_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87565.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
MerC mercury resistance protein
|
|
SCNpilot_expt_500_bf_scaffold_1590_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23575..24090)
|
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRF2_9GAMM
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EIM02044.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Fe2+/Zn2+ uptake regulation protein
|
|
SCNpilot_expt_500_bf_scaffold_1590_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24069..24335)
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W682_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94973.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|