name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_1590_61
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
53426..54190
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D8914
UPF0271 protein CH75_21295 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
|
|
SCNpilot_expt_500_bf_scaffold_1590_62
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
54811..55779
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F86680
rbh
Uncharacterized protein {ECO:0000313|EMBL:AHX15476.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1590_63
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
55794..56450
|
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345D43D
rbh
pyrrolidone-carboxylate peptidase
|
|
SCNpilot_expt_500_bf_scaffold_1590_64
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(56517..56996)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88478.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_1590_65
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(57108..57623)
|
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8H4_9GAMM
deoxycytidine triphosphate deaminase
|
|
SCNpilot_expt_500_bf_scaffold_1590_66
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(57801..58343)
|
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8H5_9GAMM
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EIL95766.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative flavoprotein
|
|
SCNpilot_expt_500_bf_scaffold_1590_67
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(58340..59464)
|
ATPase involved in chromosome partitioning n=1 Tax=Rhodanobacter denitrificans RepID=I4WLC8_9GAMM
rbh
ATPase involved in chromosome partitioning
rbh
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AGG88475.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_1590_68
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
59641..60024
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W649_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94940.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1590_69
unknown
|
Not on your lists |
60134..60283
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_1590_70
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
60475..60675
|
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
methionyl-tRNA synthetase n=1 Tax=Dyella japonica RepID=UPI000316C8A9
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_500_bf_scaffold_1590_71].
|
|
SCNpilot_expt_500_bf_scaffold_1590_71
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
60833..61201
|
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK78_9GAMM
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_500_bf_scaffold_1590_72].
|
|
SCNpilot_expt_500_bf_scaffold_1590_72
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
61265..62470
|
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK78_9GAMM
|
|
SCNpilot_expt_500_bf_scaffold_1590_73
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(62557..62844)
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W647_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_1590_74
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
62916..63524
|
RnfABCDGE type electron transport complex subunit B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRB2_9GAMM
RnfABCDGE type electron transport complex subunit B {ECO:0000313|EMBL:EIM02004.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
electron transport complex, RnfABCDGE type, B subunit
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_75
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
63521..64159
|
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Endonuclease III n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRB1_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1590_76
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(64206..64952)
|
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W477_9GAMM
rbh
23S RNA-specific pseudouridylate synthase
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_1590_77
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
65333..65641
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W478_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94269.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1590_78
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
65852..66286
|
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWR9_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
|
|
SCNpilot_expt_500_bf_scaffold_1590_79
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(66346..67203)
|
Serine/threonine protein kinase involved in cell cycle control n=1 Tax=Rhodanobacter denitrificans RepID=I4WWS0_9GAMM
serine/threonine protein kinase involved in cell cycle control
Serine/threonine protein kinase involved in cell cycle control {ECO:0000313|EMBL:AGG89528.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_1590_80
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(67277..68026)
|
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD61_9GAMM
luciferase family oxidoreductase, group 1
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_1590_81
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
68368..69420
|
Putative signal transduction protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHH6_9GAMM
rbh
putative signal transduction protein
rbh
Putative signal transduction protein {ECO:0000313|EMBL:AGG89532.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_1590_82
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
69504..69605
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWS3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_1590_83
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(69615..70016)
|
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A43C4A
lipoprotein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_1590_84
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(70053..70823)
|
LytTR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WY31_9GAMM
response regulator of the LytR/AlgR family
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
|
|
SCNpilot_expt_500_bf_scaffold_1590_85
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(70816..72012)
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034580AA
Histidine kinase {ECO:0000313|EMBL:KGO98947.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
putative regulator of cell autolysis
|
|
SCNpilot_expt_500_bf_scaffold_1590_86
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(72143..72913)
|
Dimethylargininase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W486_9GAMM
rbh
Dimethylargininase {ECO:0000313|EMBL:EIL94277.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
|
|
SCNpilot_expt_500_bf_scaffold_1590_87
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(73192..73965)
|
Putative methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD67_9GAMM
rbh
putative methyltransferase
rbh
Putative methyltransferase {ECO:0000313|EMBL:AGG89535.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_1590_88
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
74132..74947
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPG4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89536.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|