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SCNpilot_expt_500_bf_scaffold_1590_76

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(64206..64952)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W477_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 248.0
  • Bit_score: 380
  • Evalue 1.10e-102
  • rbh
23S RNA-specific pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 244.0
  • Bit_score: 374
  • Evalue 2.50e-101
  • rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 244.0
  • Bit_score: 383
  • Evalue 1.90e-103

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGCTGGACGGGGATGGCGTGGCGATCGACGCGCAGGTGCCGTACCGCGCGGGAATGCGCCTCCACTACTACCGCGAGGTGGCGGACGAGGCGGAGATACCGTTCGTCGAGACGGTAGTGCACGCGGATGAACACCTGGTGGTGGCGGACAAGCCGCACTTCCTGCCGGTGACTCCGGCCGGAGGTTTTGTCGAGCAGACCCTGCTGCGGCGATTGATCCGCCGGCTCGACAATCCGCAGCTCGTGCCGCTGCACCGGATCGACCGCGCCACCGCCGGACTGGTGCTGTTTTCGGCGAATCCCGCCAGCCGCGCGGCTTATCAGGCCCTGTTTCGCGAGCGGCGCATCGACAAGTGCTACGAGGCGTTCGCCCCGGCCTTGCCGGCAGGGGTTTTTCCGCTCTACCGGCGTACGCGCATCGTGCAGGGCGAGCCGTTCTTCCGCATGGCCGAGGTCGAGGGTGAGCCCAACAGCGAGACGCGCATCGAGGTGATCGAGCGCGGCGACACCGACTGGCGCTATGCGCTTCATCCGATGACCGGGCGCAAGCATCAGTTGCGGGTCCACATGGCGGCGCTCGGTGCGCCGATCCGCAACGATGCGTTCTATCCCGAGCTGACGGAGGCGGCGGCGGACGATTATCGGCGGCCGCTGAAGTTGCTGGCGCGGGAGTTGGCGTTCGTCGATCCGTTGTCGGGCGAACCGCGTCGGTTCCGCAGCAAGTTGACGCTCGACGATGGCGCGTGA
PROTEIN sequence
Length: 249
VLDGDGVAIDAQVPYRAGMRLHYYREVADEAEIPFVETVVHADEHLVVADKPHFLPVTPAGGFVEQTLLRRLIRRLDNPQLVPLHRIDRATAGLVLFSANPASRAAYQALFRERRIDKCYEAFAPALPAGVFPLYRRTRIVQGEPFFRMAEVEGEPNSETRIEVIERGDTDWRYALHPMTGRKHQLRVHMAALGAPIRNDAFYPELTEAAADDYRRPLKLLARELAFVDPLSGEPRRFRSKLTLDDGA*