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SCNpilot_expt_500_bf_scaffold_1590_35

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(28265..29065)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 266.0
  • Bit_score: 432
  • Evalue 3.70e-118
tryptophan synthase, alpha chain (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 266.0
  • Bit_score: 428
  • Evalue 2.10e-117
Tryptophan synthase alpha chain n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRE3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 266.0
  • Bit_score: 432
  • Evalue 2.70e-118

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGAGCCGCATTGACACCCGCTTCGCCCAACTCAAGGCCACCGGCCGCACCGGCCTGATCCCGTTCGTCACCGCGGGCGATCCCTCGCCGCAGCACATGGTGGCGATGATGCATGCGCTGGTGGAATCGGGGGCAGACCTGATCGAGCTGGGCGTGCCGTTTTCCGATCCGATGGCAGACGGCCCGGTGATCCAGCACGCCAGTGAGCGGGCGATCGCCAAGGGCGTCGGTCTCGCGCAGGTGCTGGGCTGGGTGCATGCATTTCGCGAACGCGATGCGGAAACCCCGATCGTGCTGATGGGCTATCTGAACCCGCTGGAGATCCACGGCTACGCGCGCTTCGCACAGGAGGCCGTGGCGGCCGGCGTCGATGGCGTGCTGCTGGTCGATTGTCCGCTGGAGGAGTCGACCGTGCTGCAGTCGCTGCGCGAGGCGGGGTTGCAGCAGATCCTGCTCGCCGCGCCCACCACCGCACCTGCGCGTATGGCGCAGTTGTGCAGCTCGGCGGAAGGCTTCCTGTATTATGTATCGTTCGCTGGCGTCACCGGAGCGGCGCAGTTGAGCGTCAGCGAGATTGCCGAGCGCGTTGCCGAAGTCAGGAGCCTCGCCGGTACGCCGGTGGCGGTGGGGTTCGGCATTCGCGATGCGGCCAGCGCCGCAGCGATCGGCGGCTTCGCTGACGCGGTCGTCATCGGCAGCGCGCTGGTCGAAAGCCTGGCGGCGGCCACGGACGCGGCGGATATCACGGGTCGTGTGCGCAGTTTCCTGCAGCCGATCCGCGCGGCGCTGGATGCACGCTGA
PROTEIN sequence
Length: 267
MSRIDTRFAQLKATGRTGLIPFVTAGDPSPQHMVAMMHALVESGADLIELGVPFSDPMADGPVIQHASERAIAKGVGLAQVLGWVHAFRERDAETPIVLMGYLNPLEIHGYARFAQEAVAAGVDGVLLVDCPLEESTVLQSLREAGLQQILLAAPTTAPARMAQLCSSAEGFLYYVSFAGVTGAAQLSVSEIAERVAEVRSLAGTPVAVGFGIRDAASAAAIGGFADAVVIGSALVESLAAATDAADITGRVRSFLQPIRAALDAR*