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SCNpilot_expt_500_bf_scaffold_1590_43

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(36726..37715)

Top 3 Functional Annotations

Value Algorithm Source
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W667_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 329.0
  • Bit_score: 591
  • Evalue 5.60e-166
  • rbh
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EIL94958.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 329.0
  • Bit_score: 591
  • Evalue 7.80e-166
lactate dehydrogenase-like oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 329.0
  • Bit_score: 391
  • Evalue 2.00e-106

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGACCGACAAGCCGCGCGTCTGGGTGTCCCGCCCCACTTTCCCCGGTGTCATCGCCCGGCTGGAGCCGCATTTCCAGGTGACCGTGGAGGAGACCGAACGCAAGTTCAGTCCTGCCGAACTGGCTGCCCGGCTGGCGGGGCAGGATGCGGTGATCGTCGGCCTCAAGGACCGCATCGGCGCGGCCGAAATCGGTGCGGCCGAGCGCCTGCGTATCGTGGCCAACCTTGCAGTGGGCTACGACAACATCGACGTCGACGCGATGAGCGCTGCCGGCATCGCGGTGTCCAACACCGCCGACGTGCTCAACGAGAGCGTGGCCGACTTCGCCTGGGCGCTGCTGCTGGGCGCGGCCCGGCGCATGACTGCGGCCGAGCGCTGGCTGCGTGCCGGCCACTGGCATGCCACCGAGTTCAAGGCGTGGCTGGGCAGCGACGTGCGCGGTCGCACCCTGGGCATCCTCGGCATGGGCCGCATCGGCCAGGCCATCGCCCATCGCGCGGTCGGCTTCGGCATGCCGGTGATCTACCACAACCGCTCGCCGCTGCCCGAGGCGGTCGAGCGCGCCTGCAACGCACGCCACGTGGACAAGGCGCAGTTGCTGGGCGAGTCCGATTTCCTGGTGTTGGCCTTGCCGCTGACGCCGCGCACCCGACACGCCATCGGCGCGGCCGAGCTGGCCCTGATGAAGCCGACCGCGATGCTGGTCAACGTCGCCCGCGGCGGCATTGTCGACGACGCCGCGCTGGCCGCGGCGTTGCGCGACCGGCGCCTGGCCGGCGCGGCGCTGGACGTGTTCGAGGGCGAACCGAAGCTGCATCCGGCGCTGCTCACGCTCGACAACGTGGTGCTCAGCCCCCATATCGCCAGCGCCACGACCGATACCCGCCGCGCGATGACATCGGTGGCGGTGGACAATGTGCTCGCGTTGTTCGGCCATGGTCCGCACGCAGGACGACCACCCAACCTCCTCAACCCGAACGTGCTGTGA
PROTEIN sequence
Length: 330
MTDKPRVWVSRPTFPGVIARLEPHFQVTVEETERKFSPAELAARLAGQDAVIVGLKDRIGAAEIGAAERLRIVANLAVGYDNIDVDAMSAAGIAVSNTADVLNESVADFAWALLLGAARRMTAAERWLRAGHWHATEFKAWLGSDVRGRTLGILGMGRIGQAIAHRAVGFGMPVIYHNRSPLPEAVERACNARHVDKAQLLGESDFLVLALPLTPRTRHAIGAAELALMKPTAMLVNVARGGIVDDAALAAALRDRRLAGAALDVFEGEPKLHPALLTLDNVVLSPHIASATTDTRRAMTSVAVDNVLALFGHGPHAGRPPNLLNPNVL*