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SCNpilot_expt_500_bf_scaffold_1590_53

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 46664..47173

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRC5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 166.0
  • Bit_score: 302
  • Evalue 2.70e-79
  • rbh
transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 166.0
  • Bit_score: 302
  • Evalue 1.10e-79
  • rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 168.0
  • Bit_score: 302
  • Evalue 2.90e-79

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGAGCCGCTGGCGCCCGCCCTCGCCCGGCTCCACCGCGATCATCACCCGCGACGGCTTCGAACGGCTCAAGGCCGAACTCGACCACCTGTGGCACGTGTTGCGCCCGGAAGTGGTGAAGGCCCTCGCCGCGGCAGCCGCCGAAGGCGATCGCTCGGAGAACGCCGAATACACCTATCGCAAGAAACAGCTCGGCGAAATCGACCGCCGCGCGCGTTACCTCAGCAAACGCATTCCCGCACTGAAAGTTGCCGAGGGCGTGCCGGGCGATCGCCGCGCCGTGTTTTTCGGCGCCTGCATCGGGCTGGAGAACGTGGACAGCGGCGAAGTCCACCGCTACCGCATCGTGGGCCCGGACGAGACTGACGCCAGGCGCGGCTGGATCAGCATCGACTCGCCGCTGGCGCGGGCCGTGCTGAAGAAGCGCGTCGACGACGAATTCTCCGCCGAGCTGCCGGGCGGGCGGGCGGAGTTCGTGGTGCTGTCGGTGGATTACGAGCAGGAAGCCTGA
PROTEIN sequence
Length: 170
MSRWRPPSPGSTAIITRDGFERLKAELDHLWHVLRPEVVKALAAAAAEGDRSENAEYTYRKKQLGEIDRRARYLSKRIPALKVAEGVPGDRRAVFFGACIGLENVDSGEVHRYRIVGPDETDARRGWISIDSPLARAVLKKRVDDEFSAELPGGRAEFVVLSVDYEQEA*