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SCNpilot_expt_500_bf_scaffold_1590_56

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(49199..50536)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=666685 species="Bacteria; Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 445.0
  • Bit_score: 838
  • Evalue 4.90e-240
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 445.0
  • Bit_score: 838
  • Evalue 3.50e-240
  • rbh
ribosomal protein S12 methylthiotransferase RimO similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 445.0
  • Bit_score: 838
  • Evalue 1.10e-240
  • rbh

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGTCCCAGCCCGCCCACAAGATCGGCTTCGTCAGCCTCGGTTGCCCCAAGGCGCTGGTCGATTCCGAACGCATCCTCACCCAGCTCAAGGTCGAGGGCTACCAGATCGTGCCCAGCTACGGCGAGGCGGATGCGGTCGTGGTGAACACCTGCGGCTTCATCGACGCGGCGGTGCAGGAGTCGCTGGACTCGATCGGCACGGCGCTCAACGAGAACGGCAAGGTGATCGTTACCGGCTGCCTCGGCAAGCGCGCCGAGCTGATCCGCGAGGCGTATCCCGACGTGCTCTCGATCAGCGGCCCGCAGGACTACGCCAGCGTGATGAGCGCGGTGCACGAGGCGCTGCCGCCGAAGCGCAACAAGTTCCTCGACATCGTGCCCGATACGGGGGTCAAGCTCACCCCGAAGCACTACGCGTACCTCAAGATTTCCGAAGGCTGCAACCACCGTTGCAGCTTCTGCATCATCCCCTCGATGCGCGGCAACCTGGTCTCGCGGCCGGTCGACGAGGTGCTGGTGGAGGCCGAGAAACTGGTCAGGGGCGGCGTGAAGGAACTGCTGGTGATCTCGCAGGACACCAGCGCCTATGGCGTCGACGTGAAGTACGCCGAGCGCCCGTGGCGCGGGAAGAACTACCGCACCCGCATGACCGAGCTGTGCGAAGGCCTGTCCGAACTCGGCGCGTGGACGCGCCTGCACTACGTCTACCCGTACCCGCACGTGGACGAGCTGATGCCGCTGATGGCGGGGGGAAAAATCCTGCCCTACCTCGACATCCCGTTCCAGCACGCCAGCCCGCGCATCCTGAAATTGATGAAGCGCCCCGGCAACATCGACAAGACGCTGGAGCGCATCCGGAACTGGCGCAAGCTGGTGCCGGAGCTGACCATCCGCAGCACCTTCATCGTCGGTTTCCCCGGCGAGACCGATGCCGAGTTCGAGGAGCTGCTGGACTTCCTGCGCGAGGCCGAACTGGACCGCGTGGGCGCGTTCGCCTATTCGCCGGTGGACGGCGCCAAGGCCAACGAGCTGCCCGGCGCGGTGTCCGAGGAACTGAAGGAGGATCGCCTCGAACAGTTCATGGCGGTGCAGGCGGAAATCTCCGCCGCCAAACTGCAGCGCAAGATCGGCCGCACGCTCAAGGTGCTGGTGGACGAGGCCGGCGTCGACGGCGCGGTGGCTCGCTCGGCCGCCGATGCGCCGGAGATCGACGGCTGCGTGCTGATCGCCGACGGCCAGCAGCTGAAGCCGGGCCAGTTCGTGGACGTGGTGGTCGAGGCGGCCAGCGAACACGACCTGCACGCGCGCCTGGCGCATCCCGCGCTCAAGATCGTGTAA
PROTEIN sequence
Length: 446
MSQPAHKIGFVSLGCPKALVDSERILTQLKVEGYQIVPSYGEADAVVVNTCGFIDAAVQESLDSIGTALNENGKVIVTGCLGKRAELIREAYPDVLSISGPQDYASVMSAVHEALPPKRNKFLDIVPDTGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGNLVSRPVDEVLVEAEKLVRGGVKELLVISQDTSAYGVDVKYAERPWRGKNYRTRMTELCEGLSELGAWTRLHYVYPYPHVDELMPLMAGGKILPYLDIPFQHASPRILKLMKRPGNIDKTLERIRNWRKLVPELTIRSTFIVGFPGETDAEFEELLDFLREAELDRVGAFAYSPVDGAKANELPGAVSEELKEDRLEQFMAVQAEISAAKLQRKIGRTLKVLVDEAGVDGAVARSAADAPEIDGCVLIADGQQLKPGQFVDVVVEAASEHDLHARLAHPALKIV*