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SCNpilot_expt_500_bf_scaffold_2620_21

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(20206..21588)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10) similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 465.0
  • Bit_score: 731
  • Evalue 2.00e-208
  • rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WT13_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 462.0
  • Bit_score: 747
  • Evalue 6.50e-213
  • rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 466.0
  • Bit_score: 750
  • Evalue 1.10e-213

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGATGCGGCTGGGCGCCATCGCGATGTGGCTGCACGGTCGCCTGCTCGACGGCGACGCGACGTTGGAGCAGGCCGAGATCACCGGCGTGGCGATCGACACGCGCAAGCTGCGCCCGGGCGAACTGTTCGCGGCGATCAAGGGCGAGCACGTGGACGGCCACGACTACCTGGACGAAGCGCTGGCCCGCGGCGCGGTGGCGGCGCTGGTGACGCATCCGGTCGACAGCGCGCTGCCGCAGCTGCGCGTCGACGACGTCGAGGTGGCGCTGGGCGACCTGGCCAGCGCGGTGCGCGCGCAACGCGACGTGCGCGTGGTCGGCATCACCGGTTCCAACGGCAAGACCACGGTGAAGACCCTGGTCGCCTCGATCCTGTCGCGCCATGGCCGCACGCACGTCAGCAGCGGCAACTACAACAACGAGCTGGGCCTGCCGCTGAGCCTGCTGGCAATGCCGCGCGACACCGAATACGCGGTGTTCGAGATGGGCGCGGGCAAGCCCGGCGACATCGCCTATCTCGCTGCCATCGCGCGGCCAGATATTGGCCTCGTCACGCTCATCGCGCCGGCCCATCTTGAACGCATGGGCAGCATCGAGGGCGTGGCCGAAACCAAGGGCGCGCTGTACCAGGCCTTGCCGGCCGACGGCATTGCCATCATCAACGCGGACGACAGCTTTGCCAGCTTCTTCGGCGGGCTCGCCGGTGCGCGCAAGACGCTGCGTTTCGGCCTGGAGCAACCGGCCGACGTGCGCGCCGGTGCGATCGAACTGCGCGCCGACGGTTCGCGCTTCATGCTGCACACGCCGGCGGGCGAGGCCGAGGTGACCTTGCCGCTGCCCGGTCGCCACAACGTGGCCAACGCACTGGCCGCCACTGCGGTGGCGCTGGCGTTGCAGGTGCCGCTGGAAACCATCGTTGCCGGGCTGGAGCAGGTTTCCGGCGTGGCCGGTCGCCTGCGCCGCCTGGTTGCCGTCGGCGGCTGGACGGTCATCGACGACAGCTACAACGCCAACCCTGGTTCCATGGCGGCTGCCATCGACACGCTGCTGCTGGCCGGCGGCGAGCGCTGGCTGGTGCTGGGCGACATGGCCGAGCTGGGCGCGGACGCGCGTGCGCTGCATGCGGGCATCGGCGAGCGGGCGCGCGAGCGCGGCGTCGATCGCCTGTTCGCGGTCGGTCCGCTGGGCGCGGCCACGGTGGAGGCGTTCGGCGCTGGCGGCGAGCATTTTTCCGACAAGCCGGCCCTGATCGACGCGCTGCGCGCGCAGCTGCATGCGGGCGTCAACTGCCTGGTCAAGGGTTCGCGTTCGGCCGGCATGGAACAGGTGGTGGCCGCGCTCATTGCCGCGCCCGCCCACGGAGGTGCGAACGATGCTGCTTGA
PROTEIN sequence
Length: 461
MMRLGAIAMWLHGRLLDGDATLEQAEITGVAIDTRKLRPGELFAAIKGEHVDGHDYLDEALARGAVAALVTHPVDSALPQLRVDDVEVALGDLASAVRAQRDVRVVGITGSNGKTTVKTLVASILSRHGRTHVSSGNYNNELGLPLSLLAMPRDTEYAVFEMGAGKPGDIAYLAAIARPDIGLVTLIAPAHLERMGSIEGVAETKGALYQALPADGIAIINADDSFASFFGGLAGARKTLRFGLEQPADVRAGAIELRADGSRFMLHTPAGEAEVTLPLPGRHNVANALAATAVALALQVPLETIVAGLEQVSGVAGRLRRLVAVGGWTVIDDSYNANPGSMAAAIDTLLLAGGERWLVLGDMAELGADARALHAGIGERARERGVDRLFAVGPLGAATVEAFGAGGEHFSDKPALIDALRAQLHAGVNCLVKGSRSAGMEQVVAALIAAPAHGGANDAA*