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SCNpilot_expt_500_bf_scaffold_2620_26

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(25079..26038)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 302.0
  • Bit_score: 550
  • Evalue 1.10e-153
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVF2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 302.0
  • Bit_score: 550
  • Evalue 8.10e-154
  • rbh
S-adenosyl-methyltransferase MraW similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 309.0
  • Bit_score: 549
  • Evalue 9.60e-154
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGCGGGATGGGACGGGAGTGCGCTCGGTGCAATTGCAGCATGTCCCGGTGATGCTGGGCGAGGCGGTGGAGGGATTGTCCGTGCAGGCAGACGGGCGCTATCTGGACGGCACGTTCGGGCGCGGTGGTCATGCGCGCGCGGTGCTGTCGCGCCTGGGTCCGGCCGGCCGGCTCTTGTTGATGGATCGCGATCCGGCCGCGATCGCCGCTGCGCGGGCCGAGTTTGCCGCCGACGCACGGGTGGCGATCCGCCACGCCAACTTCTCCAGCCTGGCCGAGTGGGACGAGACCGCCGCCGGGCTCGACGGCGTGCTGCTCGACCTGGGCGTCTCGTCGCCGCAACTGGACGAGGCCGCGCGCGGCTTCAGCTTCATGGCCGATGCGCCGCTGGACATGCGCATGGACACCACGCAGGGCGAGAGCGCCGCCGATTTCCTCGCTCACGCCAGCGAGCGCGAGATCGCCGACGTGCTGTGGAATTACGGCGAGGAGCGCCACAGCCGGCGCATCGCCCGCGCCATCGTGGCCGATCGCGACGCCACCCCGTTCACCCGCACCGGCCAGCTGGCCGCGCTGATCGAGCGCGTGGTGGGCCGGCGCGAGCCGGGCAAGCATCCGGCCACGCGCAGCTTCCAGGCGCTGCGCATTCGCGTGAACGGCGAGCTGGACGCCTTGCGGCAGGGTCTGGACGCCGCGCTGGAACGGCTCAAGCCGGGCGGGCGGCTGTCGGTGATCAGTTTCCACTCGCTGGAGGATCGCGCGGTGAAGCTGTTCATCCGCGACCACTCCGGACGCGTGCAGAACAGTCGTCGCGGACCGCCAGTGCAGGGGGCGCCGGCGCAGTTGGTGGCAATCGGCAAGGCGCAATTCCCGTCCGAGGCCGAGCTGGCCGCCAATCCGCGGTCACGCTCGGCGGTGCTGCGCGTGGCCGAGAAGCTGCCGCGGGAGGTCGCCGCGTGA
PROTEIN sequence
Length: 320
MRDGTGVRSVQLQHVPVMLGEAVEGLSVQADGRYLDGTFGRGGHARAVLSRLGPAGRLLLMDRDPAAIAAARAEFAADARVAIRHANFSSLAEWDETAAGLDGVLLDLGVSSPQLDEAARGFSFMADAPLDMRMDTTQGESAADFLAHASEREIADVLWNYGEERHSRRIARAIVADRDATPFTRTGQLAALIERVVGRREPGKHPATRSFQALRIRVNGELDALRQGLDAALERLKPGGRLSVISFHSLEDRAVKLFIRDHSGRVQNSRRGPPVQGAPAQLVAIGKAQFPSEAELAANPRSRSAVLRVAEKLPREVAA*