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SCNpilot_expt_500_bf_scaffold_3118_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(1449..2996)

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQW8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 518.0
  • Bit_score: 849
  • Evalue 1.40e-243
  • rbh
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:EIL92900.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 509.0
  • Bit_score: 848
  • Evalue 5.50e-243
beta-xylosidase similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 518.0
  • Bit_score: 843
  • Evalue 4.00e-242
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1548
ATGCGCCTCCCGGCCGCCTTCCGCCATTTCCTGCTCGGCCTGTGCGCCAGCGCCTTGCTGGTTGGCTCCGCCCTCGCGGCCACGCCGGCCACCGTGCAGATCCGCGTCGACGCGCAGGCCGCCGGCACGCCGTTCCCGCACTTCTGGGAAACCATGTTCGGCTCCGGCCGCGCCTCGCTGTCGCTGCGCGACGATTACCGCAAGGACCTGGACGCCGTGCGCGAGGCTACCGGCCTCAGCTACATCCGCTTCCACGGCATCTTCGACCACGACGTGGGCATGGTGAACCGCGACCCGGACGGCTCGATCCGCTACAACTTCTCCTACATCGACCAGATCTACGACGGCCTGCTCGAGCACGGCGTGAAGCCCTTCATCGAGCTGGGCTTCATGCCGCCGGCACTGACCTCCGACCCGAACGAGCTGCAGGAGTTCTGGTATCACCCCAACCGCGCGCCGCCGAAGAACTACGCCGAGTGGGACGCGATGATCACCGCCTTCGCCCGCCACCTGGTCGCGCGTTACGGCATCGACGAGGTAGCCAGTTGGTACTTCGAGGTGTGGAACGAGCCGAACATCGGCTTCTGGGCCGGCGAGCCGAAGCAGTCCACCTACTACACGCTGTACGACCAAACCGCCCGCGCGCTGAAGGCGGTGAGCCCACGCCTGCGCGTCGGCGGGCCGGCCACCGCACAGGGCGCGTGGGCCACGGATTTCCTGGCGCACACGAAAAAGAACAACGTGCCGGTCGATTTCCTCAGCACCCACGTCTACGGCGACGACACCGCGCAGAACGTGTTCCACAGCGACGAGCACATCCCGCGCCGCGACATGGTCTGCCGCACGGTGGACAAGGTGCACAAGGAGATCCTCGCCTCGCCCTACCCGCAGATGCCGCTGGTGTTCAGCGAGTACAACGCCAGCTACGCCAACCTGCCCAACGTCACCGACACCGTGTTCATGGGGCCGTGGATGGCCAACACGATCCGCGAGTGCGCCGGCAAGATCCAGATCATGAGCTACTGGTCGTTCTCCGACGTGTTCGAGGAACAGGGCATCGTGCGCAATCCATTCTACGGCGGCTTCGGCCTGATCGCCGCGCGACGCATCCCCAAGCCCGCATTCAACGCCTTCGCGATGCTGCACAAGCTGGGCGATCGCCAGCTGAAATCGGACTCCGACTCGGCCCTGGTGACCAGGCGCGACGACGGCACCGTGGTACTGGCACTGTGGAACTACGCCCCGCCGGTGGGCGACACCGCCAGCTACACGCCCGGCAAGCCCCGGGGCACGAACAGGCATTTCAGCGTCGACGTGCGCAACCTCGCCGCCAGCGCCCATGCCACCGTGTGGCGGCTGGACGAAAACCACGGCAACGCGGTAGCCGCGTTCGACCAGATGGGTCGCCCGGACTTCCCCAGCCGCGCGCAGATCGCCGCCTTGCGCAAGGCCGGCGAGATGGCGCCGCCGCAGCGCGTCGAACTGCATGATGGCAAGCTGCAGCTCGACATTCCGCCGCAGGGGCTGGTGGTGGTCGAGTTGCGCTGA
PROTEIN sequence
Length: 516
MRLPAAFRHFLLGLCASALLVGSALAATPATVQIRVDAQAAGTPFPHFWETMFGSGRASLSLRDDYRKDLDAVREATGLSYIRFHGIFDHDVGMVNRDPDGSIRYNFSYIDQIYDGLLEHGVKPFIELGFMPPALTSDPNELQEFWYHPNRAPPKNYAEWDAMITAFARHLVARYGIDEVASWYFEVWNEPNIGFWAGEPKQSTYYTLYDQTARALKAVSPRLRVGGPATAQGAWATDFLAHTKKNNVPVDFLSTHVYGDDTAQNVFHSDEHIPRRDMVCRTVDKVHKEILASPYPQMPLVFSEYNASYANLPNVTDTVFMGPWMANTIRECAGKIQIMSYWSFSDVFEEQGIVRNPFYGGFGLIAARRIPKPAFNAFAMLHKLGDRQLKSDSDSALVTRRDDGTVVLALWNYAPPVGDTASYTPGKPRGTNRHFSVDVRNLAASAHATVWRLDENHGNAVAAFDQMGRPDFPSRAQIAALRKAGEMAPPQRVELHDGKLQLDIPPQGLVVVELR*