ggKbase home page

SCNpilot_expt_500_bf_scaffold_3345_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 1..1200

Top 3 Functional Annotations

Value Algorithm Source
Short chain fatty acid transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSX1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 399.0
  • Bit_score: 781
  • Evalue 4.60e-223
Short chain fatty acid transporter {ECO:0000313|EMBL:EIM02563.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 399.0
  • Bit_score: 781
  • Evalue 6.40e-223
short chain fatty acids transporter similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 399.0
  • Bit_score: 766
  • Evalue 4.80e-219

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
TTCGTGGTGATCGGCGGCTACGTGCTGGCCACCGCGCCGGTGGTGGCGCGCTTCATCGACGTGCTGGCGCGCGCGCCGCGGACGGGACGCGGGGCGATCGTGTACATCGCGCTGGTGAGCATGCTGGCGTCGCTGTTGTCGTGGGGTTTCTCGCTGGTGTTCGGCGGGCTGCTGGTGCGCGCGCTGGCGCGGCGCGACGAGCTGCACATGGATTACCGCGCAGCGGGTGCGGCGGCGTATCTCGGCCTGGGCGCGATCTGGGCGATGGGGTTGTCCTCGTCGGCGGCGCAGTTGCAGGCGAACCCGGCCAGCATGCCGCCGGGCCTGCTGGCGATCACCGGCGTGCTGCCCTTCAGCCAGACCATCTTCCTGTGGCAGTCGATCGTGCTGACCGCGGTGCTGATCGTGGTGTCGCTGCTGGTGTGCTGGTTCACCGCGCCGTCGGATGCGAACGCCCGCACCTCGAAGGATTTCGACATCGGCGAAAGCTCGACGCCCGCGTTGCCGCCGCGCACGCGCCCGGGCGAGTGGCTGGAATACAGCCCGCTGCTGGCGCTGGCGATCGGCCTGCTGGGGCTGGGCTGGCTGGGCCACGAGTTCGCGACCAAGCCGGCGGTGACCGCGATCGCCAACCTCAATACCTACAACTTCCTGTTCCTGACCGCAGGGCTCCTGCTGCACTGGCGCCCGCGCAGCTTCCTCGACGCCGTGCATCGCGCCGTGCCGAGCACCGCCGGCGTGCTGATCCAGTTTCCGCTGTACGGCGGCATCGCCGCCCTGCTCACCCACGTGCCCGGCGCCGACGGCTCCACCCTGGCGCACCGGTTGTCGAACCTGTTCGTGCACATTGCCGGGCAGGAAAGCTTCCCCGCGGTGATGGGCGCGTACTCGGCGATCCTCGGCTTCTTCGTGCCCTCCGGTGGCGGCAAGTGGCTGGTCGAGGCGCCGTACGTGATGCAGGCGGCGAACGACCTGCACGTGCACCTGGGCTGGGCGGTGCAGGTATACAACGCGGCCGAGGCGCTGCCCAACCTGATCAACCCGTTCTGGATGCTGCCGCTGCTCGGCGTGCTGGGGCTGAAAGCGCGCGACGTGGTCGGCTACACCTTCGTGCAACTGGTGGTGCACGTGCCGCTGGTGCTGGGCATGCTGTGGCTGCTGGGCATGACGCTGGACTACGTGCCGCCGGTGATGCCGTAG
PROTEIN sequence
Length: 400
FVVIGGYVLATAPVVARFIDVLARAPRTGRGAIVYIALVSMLASLLSWGFSLVFGGLLVRALARRDELHMDYRAAGAAAYLGLGAIWAMGLSSSAAQLQANPASMPPGLLAITGVLPFSQTIFLWQSIVLTAVLIVVSLLVCWFTAPSDANARTSKDFDIGESSTPALPPRTRPGEWLEYSPLLALAIGLLGLGWLGHEFATKPAVTAIANLNTYNFLFLTAGLLLHWRPRSFLDAVHRAVPSTAGVLIQFPLYGGIAALLTHVPGADGSTLAHRLSNLFVHIAGQESFPAVMGAYSAILGFFVPSGGGKWLVEAPYVMQAANDLHVHLGWAVQVYNAAEALPNLINPFWMLPLLGVLGLKARDVVGYTFVQLVVHVPLVLGMLWLLGMTLDYVPPVMP*