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SCNpilot_expt_500_bf_scaffold_3363_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 3581..5245

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 402.0
  • Bit_score: 711
  • Evalue 6.70e-202
Elongation factor 4 n=1 Tax=Rhodanobacter denitrificans RepID=I4WR83_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 402.0
  • Bit_score: 711
  • Evalue 4.70e-202
GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 402.0
  • Bit_score: 711
  • Evalue 1.50e-202

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1665
ATGGAATTGATCCGCAACTTCTCCATCATTGCCCACATCGATCACGGCAAGTCCACGCTGGCCGACCGCATCATCCAGATCTGCGGCGGTCTGGCTGACCGCGAGATGGAAGCACCGGTGTCGCTGCCCTACACCGCGCGCGACGGCAAGACCTACCAGCTCAACTTCATCGACACCCCCGGCCACGTGGATTTCTCCTACGAGGTGAGCCGTTCGCTGGCCGCGTGCGAGGGTGCGCTGCTGGTGGTCGACGCGGCACAGGGCGTCGAGGCCCAATCCGTGGCCAACTGCTACACCGCGGTGGAGATGGGCCTGGAAGTGGTGCCGGTGCTCAACAAGATCGACCTGCCCACCGCCGACGTCGAGAAGGTCAAGGGCGAGATCGAGGCGGTGATCGGCATCGACGCCACCGACGCGGTGGCGATCAGCGCCAAGACCGGGCTCAACGTGGTCGAGGTGCTGGAGGCAATCGTGGCGCGCATCCCGCCGCCCAAGCCGCGCGACACCGATCGCCTGCAGGCGCTGATCATCGACTCGTGGTTCGACAACTACCTCGGCGTGATCTCGCTGGTGCGCGTCATGCAGGGTGAGATCAAGCCCGGCGACAAGTTGCTGGTGATGTCCACCGGGCGCAGCCACGAGGTCGACGACGTCGGCGTGTTCACGCCCAAGCGCAAGAAGCTGGACAAGCTGTCGGCGGGCGAAGTGGGCTGGATCAACGCCTCGATCAAGGACGTGCACGGCGCGCCGGTGGGCGACACGCTGACCCACGCCGGCAAGCCGGCCGCGGCGCCGCTGCCGGGCTTCCAGACCATGCAGCCGCGCGTGTTCGCCGGCCTGTTCCCGGTGTCGTCGGACGACTTCCCGGCGATGCGCGAGGCGCTGGACAAGCTGCGCTTGAACGACGCCGCGCTGTTCTTCGAGCCGGAGTCCTCCGAGGCGATGGGCTTCGGCTTCCGCTGCGGCTTCCTCGGCATGCTGCACATGGAAATCGTGCAGGAGCGGCTGGAGCGCGAATACGACCTCAACCTGATCACCACCGCACCCACGGTGGTTTACGAGGTGCTGCTCAGCGACGGCTCGATCCTGCAACTGGACAACCCGGCCAAGCTGCCGACCAACTCCAGCCTGATCCAGGAAATCCGCGAAAAAGCGCGGCGTGCAGCGTTCGATCCAGTACCTGGCCACCCAGGTGCAGATCAGCTACGAGATGCCGCTGGCCGAGGTGGTGATGGATTTCTTCGACCGGCTGAAGTCCGTTTCGCGCGGCTACGCCTCGATGGATTACCACTTCGATCGTTTCGAGGCCGGTCCGTTCGTGCGCACCGATGTGCTGATCAACGGCGAGCGCGTCGACGCGCTGAGCCTGATCGTGCACCGCAGCCACGCCGACCGCCGCGGCCGCGAACTGGTCGAGCGCATGAAGGAGCTGATTCCGCGCCAGCAATTCGACGTGGCGATCCAGGCCGCGATCGGCGCGCAGATCATCGCCCGCTCGACGGTGAAGGCATTGCGCAAGAACGTGCTGGCCAAGTGCTACGGCGGCGACGTCAGCCGCAAGAAGAAGCTGCTGGAGAAACAGAAGGAAGGCAAAAAACGGATGAAGCAGGTCGGGCGGGTCGAGATCCCCCAGGAAGCCTTCCTCGCCGTGTTGAAAGTGGATAA
PROTEIN sequence
Length: 555
MELIRNFSIIAHIDHGKSTLADRIIQICGGLADREMEAPVSLPYTARDGKTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQSVANCYTAVEMGLEVVPVLNKIDLPTADVEKVKGEIEAVIGIDATDAVAISAKTGLNVVEVLEAIVARIPPPKPRDTDRLQALIIDSWFDNYLGVISLVRVMQGEIKPGDKLLVMSTGRSHEVDDVGVFTPKRKKLDKLSAGEVGWINASIKDVHGAPVGDTLTHAGKPAAAPLPGFQTMQPRVFAGLFPVSSDDFPAMREALDKLRLNDAALFFEPESSEAMGFGFRCGFLGMLHMEIVQERLEREYDLNLITTAPTVVYEVLLSDGSILQLDNPAKLPTNSSLIQEIREKARRAAFDPVPGHPGADQLRDAAGRGGDGFLRPAEVRFARLRLDGLPLRSFRGRSVRAHRCADQRRARRRAEPDRAPQPRRPPRPRTGRAHEGADSAPAIRRGDPGRDRRADHRPLDGEGIAQERAGQVLRRRRQPQEEAAGETEGRQKTDEAGRAGRDPPGSLPRRVESG*