name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_3363_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..446
|
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR79_9GAMM
diguanylate cyclase (GGDEF) domain-containing protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_3363_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
562..1185
|
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL3_9GAMM
rbh
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIM01405.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA polymerase, sigma-24 subunit, RpoE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1182..1841
|
Negative regulator of sigma E activity n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL4_9GAMM
negative regulator of sigma E activity
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_3363_4
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1778..2908)
|
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JVH9_BURP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA49128.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
|
|
SCNpilot_expt_500_bf_scaffold_3363_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2970..3404
|
Periplasmic serine protease, Do/DeqQ family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q4_9GAMM
periplasmic serine protease, Do/DeqQ family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_3363_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3581..5245
|
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Elongation factor 4 n=1 Tax=Rhodanobacter denitrificans RepID=I4WR83_9GAMM
GTP-binding protein LepA
|
|
SCNpilot_expt_500_bf_scaffold_3363_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5351..6184
|
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Rhodanobacter sp. 115 RepID=I4VM51_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6686..7345
|
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ribonuclease III (EC:3.1.26.3)
rbh
Ribonuclease 3 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL9_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_9
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7424..8260
|
GTP-binding protein Era n=1 Tax=Dyella ginsengisoli RepID=UPI00034D165F
GTP-binding protein Era
Tax=BJP_IG2102_Gammaproteobacteria_62_140
|
|
SCNpilot_expt_500_bf_scaffold_3363_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8387..9136
|
DNA repair protein RecO n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPM1_9GAMM
rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA replication and repair protein RecO
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9307..10059)
|
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR89_9GAMM
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EIM01414.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative two-component hybrid sensor and regulator
|
|
SCNpilot_expt_500_bf_scaffold_3363_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10084..12078
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEV5_9GAMM
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89339.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_3363_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12176..12784
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR91_9GAMM
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89338.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_3363_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12933..14270
|
23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
rbh
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Rhodanobacter denitrificans RepID=M4NGW6_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14385..14906
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R5_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95156.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_3363_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14900..15913
|
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Beta-hexosaminidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R6_9GAMM
rbh
beta-glucosidase-like glycosyl hydrolase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15910..16473
|
Hypoxanthine-guanine phosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R7_9GAMM
rbh
hypoxanthine-guanine phosphoribosyltransferase
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
SCNpilot_expt_500_bf_scaffold_3363_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16617..17378
|
purine nucleoside phosphorylase (EC:2.4.2.28)
rbh
Probable S-methyl-5'-thioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.44 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Purine nucleoside phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR96_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17530..17694
|
Cold shock protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPN0_9GAMM
Cold shock protein {ECO:0000313|EMBL:EIM01422.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cold shock protein
|
|
SCNpilot_expt_500_bf_scaffold_3363_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17917..18822
|
Putative reductase R2APBS1_2220 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative reductase UUC_09943 n=1 Tax=Rhodanobacter denitrificans RepID=I4WRA0_9GAMM
rbh
putative paraquat-inducible protein B
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18764..19084
|
Putative reductase UUA_05142 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Putative reductase UUA_05142 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP46_9GAMM
putative paraquat-inducible protein B
|
|
SCNpilot_expt_500_bf_scaffold_3363_22
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19111..19728
|
cell division protein Fic n=1 Tax=Nevskia ramosa RepID=UPI0003B6083D
NODE_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97324.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
fic_[C]; Fic family putative cell filamentation protein
|
|
SCNpilot_expt_500_bf_scaffold_3363_23
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19735..19932)
|
NODE_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97323.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
|
|
SCNpilot_expt_500_bf_scaffold_3363_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20097..20594)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NI21_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89318.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_expt_500_bf_scaffold_3363_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20872..22371)
|
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Catalase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z6_9GAMM
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22587..23639
|
alcohol dehydrogenase; K13979 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-]
Alcohol dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z7_9GAMM
rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:EIL95238.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
|
|
SCNpilot_expt_500_bf_scaffold_3363_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23712..24266)
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z8_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95239.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25340..25759
|
Uncharacterized protein {ECO:0000313|EMBL:CEG09422.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
id=2702838 bin=GWF1_Xanthomonadales_69_6 species=Brucella abortus genus=Brucella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
|
|
SCNpilot_expt_500_bf_scaffold_3363_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26387..27025)
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W701_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95242.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3363_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26980..27873)
|
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W702_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95243.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|